Pre_GI: BLASTP Hits

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Query: NC_008463:4133700:4145464 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 4145464, End: 4145865, Length: 402

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003295:3421520:3469781346978134712411461Ralstonia solanacearum GMI1000, complete genomePUTATIVE DRUG EFFLUX LIPOPROTEIN2e-39160
NC_014500:842493:8475078475078489851479Dickeya dadantii 3937 chromosome, complete genomeouter membrane protein8e-36148
NC_015183:2483653:2505440250544025068821443Agrobacterium sp. H13-3 chromosome, complete genomenodulation protein T precursor2e-0961.2
NC_003062:2506959:2525229252522925267701542Agrobacterium tumefaciens str. C58 chromosome circular, completehypothetical protein8e-0855.8
NC_003304:2507000:2525429252542925268831455Agrobacterium tumefaciens str. C58 chromosome circular, completenodulation protein T precursor9e-0855.8
NC_016830:4010637:4018716401871640201041389Pseudomonas fluorescens F113 chromosome, complete genometype I secretion outer membrane protein1e-0652
NC_012660:3179980:3193751319375131951661416Pseudomonas fluorescens SBW25 chromosome, complete genomeouter membrane component of multidrug efflux system2e-0651.6
NC_007947:1703326:1703326170332617047711446Methylobacillus flagellatus KT, complete genomeRND efflux system, outer membrane lipoprotein, NodT6e-0649.7