Pre_GI: BLASTP Hits

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Query: NC_008435:604772:616082 Rhodopseudomonas palustris BisA53, complete genome

Start: 616082, End: 618766, Length: 2685

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011004:4073916:4079396407939640820802685Rhodopseudomonas palustris TIE-1, complete genometype III restriction protein res subunit01598
NC_011420:69843:7714377143798242682Rhodospirillum centenum SW, complete genometype III restriction enzyme, res subunit, putative0781
NC_016593:1466226:1485223148522314878352613Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetype III restriction enzyme, res subunit0766
NC_007404:974461:99728599728510000202736Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein0760
NC_015422:1876102:1882947188294718856852739Alicycliphilus denitrificans K601 chromosome, complete genometype III restriction protein res subunit0749
NC_007434:3973145:3981844398184439845792736Burkholderia pseudomallei 1710b chromosome I, complete sequenceType III restriction-modification enzyme helicase subunit0744
NC_011060:330437:3326933326933353742682Pelodictyon phaeoclathratiforme BU-1, complete genometype III restriction protein res subunit0743
NC_006513:1379735:1452048145204814547832736Azoarcus sp. EbN1, complete genomehypothetical protein0741
NC_013016:1441424:1445753144575314484642712Neisseria meningitidis alpha14 chromosome, complete genomeputative type III restriction enzyme0741
NC_012560:5338707:5346025534602553487962772Azotobacter vinelandii DJ, complete genomeType III restriction enzyme, res subunit0740
NC_021150:5298500:5303917530391753066882772Azotobacter vinelandii CA6, complete genomeType III restriction enzyme, res subunit0740
NC_010524:4644587:4669138466913846718762739Leptothrix cholodnii SP-6, complete genometype III restriction protein res subunit0736
NC_015731:1:1395613956166822727Nitrosomonas sp. Is79A3 chromosome, complete genometype III restriction protein res subunit0727
NC_013410:2253631:2265674226567422683552682Fibrobacter succinogenes subsp. succinogenes S85 chromosome,type III restriction protein res subunit4e-123442
NC_002935:781172:7811727811727837242553Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein5e-45183
NC_016787:733685:7437997437997463512553Corynebacterium diphtheriae HC03 chromosome, complete genomeputative DNA restriction-modification system, restriction enzyme5e-45183
NC_016782:720000:7302507302507327872538Corynebacterium diphtheriae 241 chromosome, complete genomeputative DNA restriction-modification system, restriction enzyme4e-45183
NC_016786:720000:7302197302197327562538Corynebacterium diphtheriae HC01 chromosome, complete genomeputative DNA restriction-modification system, restriction enzyme4e-45183
NC_007164:622000:6325186325186351122595Corynebacterium jeikeium K411, complete genomeputative DNA restriction-modification system, restriction enzyme4e-44180
NC_018720:47984:6036160361629582598Bifidobacterium asteroides PRL2011 chromosome, complete genomeputative type III restriction enzyme2e-43177
NC_008699:1132790:1145470114547011479922523Nocardioides sp. JS614, complete genometype III restriction enzyme, res subunit1e-42175
NC_014215:2295500:2305386230538623079592574Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Putative type III restriction enzyme1e-39165
NC_007164:1434305:1455325145532514579012577Corynebacterium jeikeium K411, complete genomeputative DNA restriction-modification system, restriction enzyme1e-34149
NC_002689:1548000:1552703155270315556272925Thermoplasma volcanium GSS1, complete genomeType III restriction-modification enzyme, helicase subunit6e-1997.1
NC_014010:1392536:1409264140926414119752712Candidatus Puniceispirillum marinum IMCC1322 chromosome, completetype III restriction protein res subunit7e-1790.1
NC_007404:1570000:1581096158109615838132718Thiobacillus denitrificans ATCC 25259, complete genometype III restriction-modification enzyme helicase subunit1e-1689.4
NC_017080:3712000:3727554372755437302352682Phycisphaera mikurensis NBRC 102666, complete genomeputative restriction endonuclease1e-1586.3
NC_013156:980888:9821339821339849272795Methanocaldococcus fervens AG86, complete genome2e-1585.5
NC_009455:1025915:1038026103802610407072682Dehalococcoides sp. BAV1 chromosome, complete genometype III restriction enzyme, res subunit5e-1480.5
NC_009621:389181:3955913955913982722682Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequencetype III restriction protein res subunit2e-1378.6
NC_009720:464078:4741434741434770762934Xanthobacter autotrophicus Py2, complete genometype III restriction protein res subunit4e-1377.8
NC_014034:1330843:1337342133734213399512610Rhodobacter capsulatus SB1003 chromosome, complete genometype III restriction-modification system RcaSBIIP, Res subunit5e-1170.5
NC_009937:3748885:3760124376012437627152592Azorhizobium caulinodans ORS 571, complete genomeconserved hypothetical protein7e-1170.1
NC_015577:1392390:1402360140236014049302571Treponema azotonutricium ZAS-9 chromosome, complete genometype III restriction enzyme, res subunit8e-1066.6
NC_013207:19154:3722337223397302508Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446type III restriction protein res subunit3e-0964.7
NC_009253:897684:9235479235479261412595Desulfotomaculum reducens MI-1 chromosome, complete genometype III restriction enzyme, res subunit4e-0964.3
NC_012917:985617:9906859906859933182634Pectobacterium carotovorum subsp. carotovorum PC1, complete genometype III restriction protein res subunit7e-0963.5
NC_021184:4312000:4318212431821243201101899Desulfotomaculum gibsoniae DSM 7213, complete genomeDNA/RNA helicase, superfamily II1e-0863.2
NC_008261:421000:4345364345364377003165Clostridium perfringens ATCC 13124, complete genometype III restriction-modification system, Res subunit3e-0861.6
NC_015278:176508:1805601805601828212262Aerococcus urinae ACS-120-V-Col10a chromosome, complete genomehypothetical protein3e-0861.6
NC_009483:3173464:3175528317552831781732646Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein4e-0860.8
NC_021184:1484352:1498357149835715014253069Desulfotomaculum gibsoniae DSM 7213, complete genomerestriction endonuclease5e-0860.5
NC_007930:21793:3565835658382852628Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,Type III restriction-modification system restriction subunit9e-0859.7
NC_018867:10238:6040760407634903084Dehalobacter sp. CF chromosome, complete genomeType III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal1e-0759.7
NC_010337:2950500:2955172295517229582403069Heliobacterium modesticaldum Ice1, complete genometype iii restriction enzyme, res subunit2e-0758.5
NC_014377:1943476:1960072196007219631703099Thermosediminibacter oceani DSM 16646 chromosome, complete genomeType III site-specific deoxyribonuclease2e-0758.5
NC_008942:1198000:1224818122481812280483231Methanocorpusculum labreanum Z, complete genomehypothetical protein3e-0757.8