Pre_GI: BLASTP Hits

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Query: NC_008358:263458:266410 Hyphomonas neptunium ATCC 15444, complete genome

Start: 266410, End: 266973, Length: 564

Host Lineage: Hyphomonas neptunium; Hyphomonas; Hyphomonadaceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Marine member of dimorphic prosthecate bacteria. This organism is also known as Hyphomicrobium neptunium. It has a biphasic life style, which consists of a motile phase of flagellated swarmer cells, and a cessile phase in which a long prosthecate is produced at one end of the bacteria through which budding cells emerge. Newly budded cells in turn produce flagella and go through a motile phase and the cycle continues. These organisms can colonize the surfaces of marine environments which enables additional species to colonize at later stages. This organism may be of use in treatment of water as they attach to a solid surface and are capable of degradation of a number of pollutants including aromatic hydrocarbons, dimethyl sulfoxide and methyl chloride.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016745:546249:5462495462495490832835Oceanimonas sp. GK1 chromosome, complete genometwo-component hybrid sensor and regulator2e-31135
NC_012988:769981:7831147831147862003087Methylobacterium extorquens DM4, complete genomediguanylate cyclase/phosphodiesterase1e-28125
NC_012483:1567253:1587454158745415885631110Acidobacterium capsulatum ATCC 51196, complete genomeGAF domain/GGDEF domain protein2e-27122
NC_011757:5102732:5112434511243451167054272Methylobacterium chloromethanicum CM4, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)6e-27120
NC_003902:4430621:443702644370264437886861Xanthomonas campestris pv. campestris str. ATCC 33913, completehistidine kinase/response regulator hybrid protein7e-27120
NC_007086:4489153:449460944946094495469861Xanthomonas campestris pv. campestris str. 8004, complete genomehistidine kinase/response regulator hybrid protein7e-27120
NC_007516:731193:757162757162757884723Synechococcus sp. CC9605, complete genomeGAF3e-26118
NC_014958:3346500:3350668335066833521971530Deinococcus maricopensis DSM 21211 chromosome, complete genomeGAF sensor-containing diguanylate cyclase4e-26117
NC_013730:778076:7780767780767820053930Spirosoma linguale DSM 74, complete genomemulti-sensor hybrid histidine kinase9e-26116
NC_010501:3448389:3474392347439234754291038Pseudomonas putida W619, complete genomediguanylate cyclase with GAF sensor2e-25115
NC_014958:66120:8100881008820601053Deinococcus maricopensis DSM 21211 chromosome, complete genomeputative GAF sensor protein1e-24112
NC_003919:2824000:2847359284735928483991041Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein3e-24111
NC_007508:2941889:2955795295579529568801086Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative sensor protein3e-24111
NC_007677:324000:3336823336823370383357Salinibacter ruber DSM 13855, complete genomesensory box/ggdef family protein, putative5e-24110
NC_008027:2331617:2347081234708123481271047Pseudomonas entomophila L48, complete genomediguanylate cyclase (GGDEF domain)8e-24109
NC_015638:3113253:3115596311559631168071212Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeGAF sensor signal transduction histidine kinase3e-23107
NC_009512:3618055:3629390362939036304271038Pseudomonas putida F1, complete genomediguanylate cyclase3e-23107
NC_009659:1050532:108753810875381088500963Janthinobacterium sp. Marseille chromosome, complete genomediguanylate cyclase9e-23106
NC_009649:94871:107129107129108085957Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,hypothetical protein9e-23106
NC_012721:2406874:2423173242317324242911119Burkholderia glumae BGR1 chromosome 2, complete genomePutative GAF sensor protein7e-23106
NC_005070:334952:374938374938375657720Synechococcus sp. WH 8102, complete genomehypothetical protein1e-22105
NC_011757:39881:6236162361648742514Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase4e-22104
NC_007513:1503955:150800415080041508741738Synechococcus sp. CC9902, complete genomeGAF5e-22103
NC_014500:2589089:2601375260137526036332259Dickeya dadantii 3937 chromosome, complete genomesensory box/GGDEF family protein4e-21101
NC_019745:2346970:2367232236723223697362505Gloeocapsa sp. PCC 7428, complete genomemulti-sensor hybrid histidine kinase4e-21100
NC_014483:562594:5796755796755821522478Paenibacillus polymyxa E681 chromosome, complete genomeGAF domain containing protein5e-21100
NC_010505:5525461:553695555369555537503549Methylobacterium radiotolerans JCM 2831, complete genomeputative GAF sensor protein1e-2099
NC_009656:2663387:2677893267789326796951803Pseudomonas aeruginosa PA7 chromosome, complete genomecyclic diguanylate phosphodiesterase/diguanylate cyclase1e-2099
NC_013850:1753716:175655617565561757527972Klebsiella variicola At-22 chromosome, complete genomediguanylate cyclase with GAF sensor4e-2097.8
NC_012912:2216749:2226407222640722285752169Dickeya zeae Ech1591, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)1e-1996.3
NC_007722:851129:8623228623228634191098Erythrobacter litoralis HTCC2594, complete genomeputative signal transduction histidine kinase with GAF domain1e-1995.9
NC_011757:1288637:1288637128863712901391503Methylobacterium chloromethanicum CM4, complete genomesignal transduction histidine kinase1e-1995.9
NC_014221:3137952:3154798315479831578993102Truepera radiovictrix DSM 17093 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)1e-1995.9
NC_010511:6067000:6125902612590261270741173Methylobacterium sp. 4-46 chromosome, complete genomesignal transduction histidine kinase2e-1995.5
NC_012880:2425330:2438701243870124408572157Dickeya dadantii Ech703, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)2e-1995.5
NC_012527:288207:2988492988493003751527Deinococcus deserti VCD115 plasmid 1, complete sequenceDiguanylate cyclase (GGDEF domain) with GAF sensor9e-1993.2
NC_012988:1540587:1540587154058715421191533Methylobacterium extorquens DM4, complete genomeHWE family histidine kinase3e-1891.3
NC_012808:4235567:4248775424877542502261452Methylobacterium extorquens AM1, complete genomeputative sensory box/GGDEF family protein4e-1891.3
NC_011757:217739:2177392177392192081470Methylobacterium chloromethanicum CM4, complete genomediguanylate cyclase with PAS/PAC and GAF sensors4e-1890.9
NC_010505:5525461:5546057554605755497313675Methylobacterium radiotolerans JCM 2831, complete genomemulti-sensor hybrid histidine kinase7e-1890.1
NC_011894:6793497:679901667990166799450435Methylobacterium nodulans ORS 2060, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)1e-1789.4
NC_010511:6067000:6143055614305561442241170Methylobacterium sp. 4-46 chromosome, complete genomesignal transduction histidine kinase4e-1787.8
NC_013757:1544348:1573944157394415758481905Geodermatophilus obscurus DSM 43160, complete genomemulti-sensor signal transduction histidine kinase7e-1786.7
NC_012808:4235567:4250581425058142523351755Methylobacterium extorquens AM1, complete genomeputative phosphodiesterase2e-1685.5
NC_011757:217739:2195632195632213591797Methylobacterium chloromethanicum CM4, complete genomediguanylate phosphodiesterase with GAF sensor(s)4e-1684.7
NC_017080:2893224:2893224289322428955122289Phycisphaera mikurensis NBRC 102666, complete genomeputative two-component system sensor histidine kinase4e-1581.3
NC_012918:4648220:4663966466396646652911326Geobacter sp. M21 chromosome, complete genomeGAF sensor signal transduction histidine kinase2e-1479
NC_011146:4505821:4528565452856545298901326Geobacter bemidjiensis Bem, complete genomeGAF sensor signal transduction histidine kinase7e-1477
NC_008255:3285561:3290740329074032931992460Cytophaga hutchinsonii ATCC 33406, complete genometwo-component sensor histidine kinase, sensor for arcA1e-1376.3
NC_008025:1889891:1904065190406519055281464Deinococcus geothermalis DSM 11300, complete genomediguanylate cyclase with GAF sensor3e-1375.1
NC_011894:6731115:6739720673972067421372418Methylobacterium nodulans ORS 2060, complete genomeputative phytochrome sensor protein4e-1374.3
NC_012880:2480000:2490854249085424927071854Dickeya dadantii Ech703, complete genomediguanylate cyclase with PAS/PAC and GAF sensors5e-1373.9
NC_011894:6793497:6807127680712768082901164Methylobacterium nodulans ORS 2060, complete genomesignal transduction histidine kinase7e-1373.6
NC_012912:4737703:4747041474704147493562316Dickeya zeae Ech1591, complete genomediguanylate cyclase with PAS/PAC and GAF sensors1e-1272.8
NC_009921:593665:5936655936655970303366Frankia sp. EAN1pec, complete genomediguanylate cyclase/phosphodiesterase with GAF sensor3e-1271.6
NC_014500:4883794:4892448489244848947692322Dickeya dadantii 3937 chromosome, complete genomesensory box protein6e-1270.5
NC_014305:66500:7505375053768221770Erwinia billingiae Eb661 plasmid pEB170, complete sequenceDiguanylate cyclase/phosphodiesterase1e-1169.3
NC_014305:66500:7250972509742871779Erwinia billingiae Eb661 plasmid pEB170, complete sequenceDiguanylate cyclase/phosphodiesterase5e-1167.4
NC_013061:2247191:2249297224929722528363540Pedobacter heparinus DSM 2366, complete genomePAS sensor protein1e-1066.2
NC_015063:122000:1222231222231239951773Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequencediguanylate phosphodiesterase5e-1063.9
NC_014623:5350116:5368481536848153706552175Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesensor protein2e-0962
NC_009664:533021:5311625311625330241863Kineococcus radiotolerans SRS30216, complete genomemulti-sensor signal transduction histidine kinase5e-0960.5
NC_014561:153143:1644164434281785Pantoea vagans C9-1 plasmid pPag1, complete sequenceUncharacterized signaling protein7e-0960.1
NC_007677:117625:1211961211961243993204Salinibacter ruber DSM 13855, complete genomeutilizing regulatory protein tutC2e-0858.5
NC_014839:170000:1892931892931910741782Pantoea sp. At-9b plasmid pPAT9B02, complete sequencediguanylate cyclase/phosphodiesterase with GAF sensor3e-0858.5
NC_010572:4024810:4037560403756040392991740Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-0858.5
NC_016943:2054688:2071109207110920728781770Blastococcus saxobsidens DD2, complete genomeSerine phosphatase RsbU, regulator of sigma subunit5e-0754.3
NC_009664:4423829:4552420455242045545192100Kineococcus radiotolerans SRS30216, complete genomediguanylate cyclase1e-0653.1
NC_008573:195317:220472220472221449978Shewanella sp. ANA-3 plasmid 1, complete sequencediguanylate cyclase with GAF sensor2e-0652.4
NC_009254:442360:4590134590134608271815Burkholderia vietnamiensis G4 chromosome 3, complete sequencediguanylate cyclase with PAS/PAC sensor3e-0651.6