Pre_GI: BLASTP Hits

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Query: NC_008278:296526:319248 Frankia alni ACN14a, complete genome

Start: 319248, End: 320816, Length: 1569

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009033:653462:6723696723696737931425Staphylothermus marinus F1, complete genomeRadical SAM domain protein3e-32140
NC_007955:1664998:1681943168194316834061464Methanococcoides burtonii DSM 6242, complete genomeFe-S protein, radical SAM family3e-25117
NC_015416:1571451:1573507157350715752581752Methanosaeta concilii GP-6 chromosome, complete genomeB12 binding domain/radical SAM domain fusion protein7e-24112
NC_013849:19404:3305733057344541398Ferroglobus placidus DSM 10642 chromosome, complete genomeRadical SAM domain protein1e-22108
NC_013851:2211120:2221844222184422232921449Allochromatium vinosum DSM 180 chromosome, complete genomeRadical SAM domain protein6e-21102
NC_014844:762794:7785687785687800221455Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRadical SAM domain-containing protein5e-2099.8
NC_011832:619874:6379966379966394651470Candidatus Methanosphaerula palustris E1-9c, complete genomeRadical SAM domain protein6e-2099.4
NC_014507:1403000:1418340141834014198121473Methanoplanus petrolearius DSM 11571 chromosome, complete genomeRadical SAM domain-containing protein7e-2099.4
NC_008639:2968000:2968727296872729705531827Chlorobium phaeobacteroides DSM 266, complete genomeMagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase3e-1997.1
NC_011060:459615:5010805010805029091830Pelodictyon phaeoclathratiforme BU-1, complete genomeRadical SAM domain protein6e-1892.8
NC_015388:719669:7410057410057428791875Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeRadical SAM domain protein1e-1791.3
NC_007356:51080:7733677336788201485Dehalococcoides sp. CBDB1, complete genomeradical SAM/B12 binding domain protein2e-1791.3
NC_009455:273519:2907222907222922061485Dehalococcoides sp. BAV1 chromosome, complete genomeradical SAM domain-containing protein2e-1791.3
NC_005085:4157257:4168930416893041705461617Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein2e-1790.9
NC_014960:1735786:1760110176011017617441635Anaerolinea thermophila UNI-1, complete genomehypothetical protein3e-1790.5
NC_008609:3672653:3684329368432936859961668Pelobacter propionicus DSM 2379, complete genomeRadical SAM domain protein4e-1789.7
NC_007954:1324062:1343878134387813455781701Shewanella denitrificans OS217, complete genomeRadical SAM6e-1789.4
NC_007759:1571425:1599922159992216012801359Syntrophus aciditrophicus SB, complete genomeFe-S oxidoreductase1e-1688.6
NC_013552:68003:9497094970964541485Dehalococcoides sp. VS, complete genomeradical SAM/B12 binding domain protein2e-1687.8
NC_014166:2959688:2960989296098929624491461Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeradical SAM domain-containing protein3e-1687
NC_009464:2523092:2544684254468425461291446Uncultured methanogenic archaeon RC-I, complete genomepredicted Fe-S cluster-binding oxidoreductase2e-1584.7
NC_008312:7546500:7570338757033875717681431Trichodesmium erythraeum IMS101, complete genomeRadical SAM2e-1584.3
NC_010814:794211:8177818177818192501470Geobacter lovleyi SZ, complete genomeRadical SAM domain protein2e-1584.3
NC_015437:1685824:1693465169346516952371773Selenomonas sputigena ATCC 35185 chromosome, complete genomeRadical SAM domain protein5e-1583.2
NC_009075:15017:3925639256411991944Burkholderia pseudomallei 668 chromosome II, complete sequenceFe-S oxidoreductase3e-1480.5
NC_011729:3955310:3971055397105539724911437Cyanothece sp. PCC 7424 chromosome, complete genomehopanoid biosynthesis associated radical SAM protein HpnJ4e-1480.1
NC_012797:1:2434224342258471506Desulfovibrio magneticus RS-1 plasmid pDMC1, complete sequencecobalamin vitamin B12-binding domain/radical SAM domain protein5e-1376.3
NC_014314:1:1298112981144441464Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeradical SAM domain-containing protein6e-1376.3
NC_018645:4104302:4114112411411241155211410Desulfobacula toluolica Tol2, complete genomeradical SAM domain-containing protein8e-1375.5
NC_012797:1:1133711337127821446Desulfovibrio magneticus RS-1 plasmid pDMC1, complete sequencehypothetical protein9e-1375.5
NC_003366:1901898:1917270191727019189491680Clostridium perfringens str. 13, complete genomeMg-protoporphyrin IX monomethyl ester oxidative cyclase5e-1273.2
NC_011653:1339868:1349215134921513503451131Thermosipho africanus TCF52B, complete genomeFe-S oxidoreductase family protein6e-1272.8
NC_008261:2117207:2132583213258321342621680Clostridium perfringens ATCC 13124, complete genomeradical SAM domain protein1e-1172
NC_007643:889755:8955118955118969651455Rhodospirillum rubrum ATCC 11170, complete genomeFe-S oxidoreductase9e-1272
NC_014623:659422:6682526682526698741623Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein9e-1272
NC_018664:985689:9878449878449896281785Clostridium acidurici 9a chromosome, complete genomecobalamin B12-binding/radical SAM domain-containing protein1e-1171.6
NC_015682:205900:2467522467522481191368Thermodesulfobacterium sp. OPB45 chromosome, complete genomeRadical SAM domain-containing protein1e-1171.6
NC_009051:2365711:2375357237535723768291473Methanoculleus marisnigri JR1, complete genomeRadical SAM domain protein2e-1171.2
NC_011296:801612:8222298222298235331305Thermodesulfovibrio yellowstonii DSM 11347, complete genomemethyltransferase, putative5e-1169.7
NC_002939:2697767:2717042271704227196362595Geobacter sulfurreducens PCA, complete genomeTPR domain/radical SAM/B12 binding domain protein6e-1169.3
NC_008262:1795914:1806633180663318083121680Clostridium perfringens SM101, complete genomeradical SAM domain protein6e-1169.3
NC_008609:2787274:2792682279268227947062025Pelobacter propionicus DSM 2379, complete genomeMagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase1e-1068.6
NC_009615:1553556:1564365156436515658221458Parabacteroides distasonis ATCC 8503 chromosome, complete genomeFe-S oxidoreductase2e-1068.2
NC_011146:3991683:3998022399802239991311110Geobacter bemidjiensis Bem, complete genomeRadical SAM domain protein2e-1067.8
NC_008609:3672653:3680168368016836839203753Pelobacter propionicus DSM 2379, complete genomeglycosyl transferase, family 22e-1067.8
NC_019977:2141677:2156291215629121573971107Methanomethylovorans hollandica DSM 15978, complete genomeB12-binding domain/radical SAM domain protein, MJ_1487 family3e-0963.9
NC_016584:3847663:3859370385937038610671698Desulfosporosinus orientis DSM 765 chromosome, complete genomeFe-S oxidoreductase5e-0963.2
NC_011060:2637893:2659239265923926608791641Pelodictyon phaeoclathratiforme BU-1, complete genomemagnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase7e-0962.8
NC_018876:2151226:2170078217007821710791002Methanolobus psychrophilus R15 chromosome, complete genomehypothetical protein7e-0962.4
NC_002932:1851070:1855813185581318574531641Chlorobium tepidum TLS, complete genomemagnesium-protoporphyrin IX monomethyl ester oxidative cyclase, 66 kDa subunit3e-0860.5
NC_018645:4104302:4131295413129541327641470Desulfobacula toluolica Tol2, complete genomeradical SAM domain-containing protein3e-0860.5
NC_008609:3732192:3741104374110437425611458Pelobacter propionicus DSM 2379, complete genomeMagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase4e-0860.1
NC_020453:6821500:6843477684347768450151539Agromonas oligotrophica S58 DNA, complete genomeFe-S oxidoreductase6e-0859.3
NC_015416:621513:6369866369866384461461Methanosaeta concilii GP-6 chromosome, complete genomeradical SAM domain-containing protein9e-0858.9
NC_017179:805867:8071378071378088911755Clostridium difficile BI1, complete genomeadenosylcobamide-dependent radical SAM protein2e-0758.2
NC_013315:796313:7975837975837993371755Clostridium difficile CD196 chromosome, complete genomeadenosylcobamide-dependent radical SAM protein2e-0758.2
NC_014844:1773424:1781867178186717831861320Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRadical SAM domain-containing protein2e-0757.8
NC_009975:1203372:1230965123096512322901326Methanococcus maripaludis C6, complete genomeRadical SAM domain protein5e-0756.6
NC_011295:246000:264635264635265300666Coprothermobacter proteolyticus DSM 5265, complete genomehypothetical protein6e-0756.2
NC_015711:346436:3487123487123502561545Myxococcus fulvus HW-1 chromosome, complete genomeradical SAM domain-containing protein1e-0655.1
NC_010511:5467009:5482434548243454842931860Methylobacterium sp. 4-46 chromosome, complete genomecobalamin B12-binding domain-containing protein2e-0654.3
NC_020126:1830147:1842953184295318444971545Myxococcus stipitatus DSM 14675, complete genomeradical SAM domain-containing protein2e-0654.3
NC_008095:1697157:1711943171194317134871545Myxococcus xanthus DK 1622, complete genomeradical SAM domain protein3e-0653.9
NC_000909:762859:7882387882387895871350Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein5e-0653.1
NC_010572:1081236:1084540108454010863931854Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative methyltransferase6e-0652.8