Pre_GI: BLASTP Hits

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Query: NC_008268:6149576:6152386 Rhodococcus sp. RHA1, complete genome

Start: 6152386, End: 6153054, Length: 669

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016111:2257166:227095022709502271552603Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator3e-69261
NC_009664:1195630:121844612184461219123678Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family2e-63242
NC_012704:652589:6543696543696554061038Corynebacterium kroppenstedtii DSM 44385, complete genometranscriptional regulator, TetR family2e-48192
NC_020126:7661551:768145276814527682090639Myxococcus stipitatus DSM 14675, complete genomeTetR family transcriptional regulator1e-47189
NC_014218:1663486:166664816666481667313666Arcanobacterium haemolyticum DSM 20595 chromosome, complete genometranscriptional regulator, TetR family2e-47188
NC_017186:10070795:100871341008713410087790657Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator3e-1478.6
NC_014318:10070730:100870691008706910087725657Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator3e-1478.6
NC_016111:3659269:367491836749183675541624Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator4e-1478.2
NC_015593:158107:183024183024183683660Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeTetR family transcriptional regulator7e-1477.4
NC_002939:173833:191349191349191960612Geobacter sulfurreducens PCA, complete genometranscriptional regulator, TetR family9e-1063.5
NC_013501:990022:996731996731997432702Rhodothermus marinus DSM 4252, complete genometranscriptional regulator, TetR family1e-0859.7
NC_016887:1714664:174835117483511749094744Nocardia cyriacigeorgica GUH-2, complete genomeTetR family transcriptional regulator2e-0859.3
NC_020126:9938287:994167999416799942269591Myxococcus stipitatus DSM 14675, complete genomeTetR family transcriptional regulator2e-0859.3
NC_009338:4869700:489720248972024897861660Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator3e-0858.5
NC_015422:4508028:453013445301344530856723Alicycliphilus denitrificans K601 chromosome, complete genomeregulatory protein TetR6e-0857.8
NC_016582:4934854:495565849556584956545888Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative tetR family transcriptional regulator7e-0857.4
NC_015578:465814:467379467379467957579Treponema primitia ZAS-2 chromosome, complete genomeTetR family transcriptional regulator7e-0857.4
NC_008010:1:138201382014416597Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencetranscriptional regulator, TetR family1e-0757
NC_015389:905165:924633924633925349717Coriobacterium glomerans PW2 chromosome, complete genomeregulatory protein TetR9e-0857
NC_009485:1487485:150760115076011508173573Bradyrhizobium sp. BTAi1 chromosome, complete genomeTetR family transcriptional regulator1e-0756.6
NC_018583:95388:110740110740111492753Gordonia sp. KTR9 plasmid pGKT3, complete sequenceTranscriptional regulator1e-0756.6
NC_009338:4869700:489432848943284894990663Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator1e-0756.6
NC_014915:3320768:336686733668673367790924Geobacillus sp. Y412MC52 chromosome, complete genomeregulatory protein TetR2e-0756.2
NC_014168:2575799:2599232259923226004761245Segniliparus rotundus DSM 44985 chromosome, complete genomeTetR family transcriptional regulator2e-0755.8
NC_015663:3742738:375320437532043753806603Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-0755.8
NC_017075:1674758:169781216978121698459648Rubrivivax gelatinosus IL144, complete genomeTetR family transcriptional regulator4e-0755.1
NC_013385:1007616:100995610099561010600645Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family5e-0754.7
NC_020181:1653261:166443116644311665033603Enterobacter aerogenes EA1509E, complete genomeTranscriptional regulator, TetR family5e-0754.7
UCMB5137:2054735:206797320679732068524552Bacillus atrophaeus UCMB-5137TetR family transcriptional regulator7e-0754.3
NC_014541:2978500:299438229943822994996615Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, TetR family8e-0753.9
NC_014840:205723:209344209344209985642Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, TetR family1e-0653.5
NC_008750:2332000:235360923536092354196588Shewanella sp. W3-18-1, complete genometranscriptional regulator, TetR family1e-0653.5
NC_008700:2788363:280763428076342808254621Shewanella amazonensis SB2B, complete genomeputative transcriptional regulator, TetR family2e-0653.1
NC_011772:2860000:286563128656312866197567Bacillus cereus G9842, complete genometranscriptional regulator, TetR family1e-0653.1
NC_012724:2443500:246195424619542462622669Burkholderia glumae BGR1 chromosome 1, complete genomeTranscriptional regulator, TetR family protein1e-0653.1
NC_015709:1459838:147418514741851474844660Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeTetR family transcriptional regulator1e-0653.1
NC_007953:314872:334745334745335404660Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, TetR family2e-0652.8
NC_013665:2132000:213526921352692135904636Methanocella paludicola SANAE, complete genomeTetR family transcriptional regulator2e-0652.8
NC_003909:2798622:280198928019892802555567Bacillus cereus ATCC 10987, complete genometranscriptional regulator, TetR family2e-0652.8
NC_011969:2706000:271071827107182711284567Bacillus cereus Q1 chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_009254:23000:259202592026573654Burkholderia vietnamiensis G4 chromosome 3, complete sequenceTetR family transcriptional regulator2e-0652.8
NC_014408:1314382:133323313332331333886654Methanothermobacter marburgensis str. Marburg chromosome, completetranscriptional regulator2e-0652.8
NC_009512:2108686:213674621367462137351606Pseudomonas putida F1, complete genometranscriptional regulator, TetR family2e-0652.8
NC_017986:4790482:483635748363574836962606Pseudomonas putida ND6 chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_011894:5056901:507420050742005074796597Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, TetR family3e-0652.4
NC_011365:1596652:161991016199101620509600Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator2e-0652.4
NC_002944:1881405:189334518933451893992648Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-0652.4
NC_011666:1572487:157707315770731577708636Methylocella silvestris BL2, complete genometranscriptional regulator, TetR family2e-0652.4
NC_010814:155834:160065160065160667603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family2e-0652.4
NC_008752:3902637:391305439130543913665612Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, TetR family3e-0652
NC_007947:290864:305887305887306441555Methylobacillus flagellatus KT, complete genometranscriptional regulator, TetR family3e-0652
NC_009921:5275694:529173252917325292325594Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family3e-0652
NC_014976:759129:785436785436786035600Bacillus subtilis BSn5 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_016935:4367000:440472344047234405346624Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative transcriptional regulator4e-0651.6
UCMB5137:1594000:160367516036751604283609Bacillus atrophaeus UCMB-5137transcriptional regulator, TetR family protein4e-0651.6
NC_010506:537833:555196555196555801606Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, TetR family5e-0651.2
NC_008062:370902:372299372299372952654Burkholderia cenocepacia AU 1054 chromosome 3, complete sequencetranscriptional regulator, TetR family5e-0651.2
NC_008544:348500:350119350119350772654Burkholderia cenocepacia HI2424 chromosome 3, complete sequencetranscriptional regulator, TetR family5e-0651.2
NC_007509:1383013:138503413850341385687654Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, TetR family6e-0650.8
NC_012691:2614603:268837726883772689009633Tolumonas auensis DSM 9187, complete genometranscriptional regulator, TetR family8e-0650.8
NC_011894:3475775:348365834836583484347690Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, TetR family8e-0650.8
NC_013406:3650300:365940836594083660070663Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator9e-0650.4
NC_013595:9994000:100114381001143810012019582Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family9e-0650.4
NC_007005:98488:131018131018131647630Pseudomonas syringae pv. syringae B728a, complete genomeregulatory protein, TetR1e-0550.4