Pre_GI: BLASTP Hits

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Query: NC_008268:3233961:3255809 Rhodococcus sp. RHA1, complete genome

Start: 3255809, End: 3257053, Length: 1245

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018681:7624000:7640808764080876418781071Nocardia brasiliensis ATCC 700358 chromosome, complete genomeFis family transcriptional regulator2e-24113
NC_016768:2764000:2770546277054627718441299Mycobacterium tuberculosis KZN 4207 chromosome, complete genometranscriptional activator7e-23108
NC_009565:1629780:1642932164293216442301299Mycobacterium tuberculosis F11, complete genomehypothetical transcriptional activator protein7e-23108
NC_002945:1621765:1635127163512716363921266Mycobacterium bovis AF2122/97, complete genometranscriptional activator protein8e-23108
NC_015848:1647523:1662481166248116637461266Mycobacterium canettii CIPT 140010059, complete genomeputative transcriptional activator protein3e-22106
NC_013929:1611940:1632189163218916334301242Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein8e-21102
NC_011770:3396637:3396637339663733978361200Pseudomonas aeruginosa LESB58, complete genomehypothetical protein2e-1997.4
NC_009338:4913510:4919772491977249210641293Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein2e-1584
NC_014414:167803:1678031678031690141212Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein2e-1583.6
NC_013159:2832552:2835826283582628371511326Saccharomonospora viridis DSM 43017, complete genomeregulator of polyketide synthase expression1e-1378.2