Pre_GI: BLASTP Hits

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Query: NC_008261:551513:557181 Clostridium perfringens ATCC 13124, complete genome

Start: 557181, End: 557780, Length: 600

Host Lineage: Clostridium perfringens; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: The species type strain, originally isolated from a human gas gangrene patient. Causative agent of gas gangrene. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a causative agent of a wide spectrum of necrotic enterotoxicoses. It also causes such animal diseases as lamb dysentery, ovine enterotoxemia (struck), pulpy kidney disease in lambs and other enterotoxemias in lambs and calves. It is commonly found in the environment (soil, sewage) and in the animal and human gastrointestinal tract as a member of the normal microflora. It is a fast growing (generation time 8-10 min) anaerobic flesh-eater. Active fermentative growth is accompanied by profuse generation of molecular hydrogen and carbon dioxide. It is also oxygen tolerant which makes it an easy object to work with in laboratories. C. perfringens have been developed and the species became a model organism in clostridial genetic studies. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. All types produce the alpha toxin (phospholipase C). Type A strains that cause gas gangrene produce alpha toxin, theta (hemolysin), kappa (collagenase), mu (hyaluronidase), nu (DNAse) and neuraminidase which are all the enzymatic factors aiding the bacterium in invading and destruction of the host tissues. Type C strains produce alpha toxin, beta toxin and prefringolysin enteritis. In addition to alpha toxin, Type B strains produce beta toxin, types B and D produce the pore forming epsilon toxin and type E strains produce iota toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014839:253961:270235270235270801567Pantoea sp. At-9b plasmid pPAT9B02, complete sequencegalactoside O-acetyltransferase1e-1169.3
NC_015164:3210885:322993732299373230659723Bacteroides salanitronis DSM 18170 chromosome, complete genomeputative O-acetyltransferase Cps9vM8e-1167
NC_006448:957830:970775970775971332558Streptococcus thermophilus LMG 18311, complete genomeexopolysaccharide biosynthesis protein2e-1065.9
NC_016609:8271000:828360782836078284221615Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein4e-1064.7
NC_008380:855246:885884885884886477594Rhizobium leguminosarum bv. viciae 3841, complete genomeputative O-acetyl transferase8e-1063.5
NC_007761:781210:787458787458788102645Rhizobium etli CFN 42, complete genomeputative acetyltransferase protein7e-0960.5
NC_014041:558000:575047575047575622576Zunongwangia profunda SM-A87 chromosome, complete genomegalactoside acetyltransferase (lacA)7e-0960.5
NC_009052:3381943:339234233923423392872531Shewanella baltica OS155, complete genometransferase hexapeptide repeat containing protein1e-0860.1
NC_009483:2993818:300610430061043006775672Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein1e-0859.7
NC_017187:1683619:168897216889721689598627Arcobacter butzleri ED-1, complete genomeputative acetyltransferase6e-0857.4
NC_013173:3679326:372003737200373720705669Desulfomicrobium baculatum DSM 4028, complete genomeAcetyltransferase (isoleucine patch superfamily)-like protein6e-0857.4
NC_014387:719245:728014728014728517504Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeacetyltransferase6e-0857.4
NC_015164:63590:776077760778131525Bacteroides salanitronis DSM 18170 chromosome, complete genometransferase hexapeptide repeat containing protein9e-0857
NC_012559:768939:7956877956877973391653Laribacter hongkongensis HLHK9, complete genomeGlycosyl transferase, group 2 family protein1e-0756.6
NC_016445:2663837:266790626679062668466561Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehexapeptide repeat-containing transferase1e-0756.6
NC_016944:238580:242649242649243209561Vibrio cholerae IEC224 chromosome I, complete sequencehexapaptide repeat-containing transferase1e-0756.6
NC_017270:220282:225631225631226191561Vibrio cholerae LMA3984-4 chromosome chromosome I, completetransferase, hexapeptide repeat family1e-0756.6
NC_002505:238569:242638242638243204567Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetransferase, hexapeptide repeat family1e-0756.6
NC_009457:2764972:276904127690412769607567Vibrio cholerae O395 chromosome 2, complete sequencehexapaptide repeat-containing transferase1e-0756.6
NC_012578:224559:228628228628229194567Vibrio cholerae M66-2 chromosome I, complete sequencetransferase, hexapeptide repeat family1e-0756.6
NC_012582:272320:276389276389276955567Vibrio cholerae O395 chromosome chromosome I, complete sequencetransferase, hexapeptide repeat family1e-0756.6
NC_012668:368305:395782395782396348567Vibrio cholerae MJ-1236 chromosome 1, complete sequencetransferase hexapeptide repeat family1e-0756.6
NC_011883:487187:495200495200495871672Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,transferase hexapeptide repeat containing protein2e-0755.5
NC_016751:1227495:122978612297861230355570Marinitoga piezophila KA3 chromosome, complete genomecarbonic anhydrase/acetyltransferase3e-0755.1
NC_016745:675909:689497689497690057561Oceanimonas sp. GK1 chromosome, complete genomehexapeptide repeat-containing transferase5e-0754.3
NC_012881:1631436:164896916489691649628660Desulfovibrio salexigens DSM 2638, complete genomeAcetyltransferase (isoleucine patch superfamily)-like protein1e-0653.5
AC_000091:2096672:210663121066312107221591Escherichia coli W3110 DNA, complete genomepredicted acyl transferase1e-0652.8
NC_010473:2183567:219352621935262194116591Escherichia coli str. K-12 substr. DH10B, complete genomepredicted acyl transferase1e-0652.8
NC_000913:2092559:210251821025182103108591Escherichia coli K12, complete genomepredicted acyl transferase1e-0652.8
NC_012759:1983975:199500119950011995591591Escherichia coli BW2952 chromosome, complete genomeputative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ1e-0652.8
NC_012914:469117:479703479703480281579Paenibacillus sp. JDR-2, complete genometransferase hexapeptide repeat containing protein3e-0651.6
NC_009464:931647:960062960062960559498Uncultured methanogenic archaeon RC-I, complete genomeputative acetyltransferase3e-0651.6
NC_007519:2847816:287004528700452870665621Desulfovibrio alaskensis G20 chromosome, complete genomeputative acetyltransferase4e-0651.2
NC_009614:3385187:338518733851873386014828Bacteroides vulgatus ATCC 8482 chromosome, complete genomeO-acetyltransferase Cps9vM5e-0650.8
NC_006138:23902:366743667437183510Desulfotalea psychrophila LSv54, complete genomesimilar to galactoside O-acetyltransferase7e-0650.4