Pre_GI: BLASTP Hits

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Query: NC_008258:3581583:3606313 Shigella flexneri 5 str. 8401, complete genome

Start: 3606313, End: 3606753, Length: 441

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. Shigella spp. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004337:3590323:368471636847163685156441Shigella flexneri 2a str. 301, complete genomehypothetical protein6e-83305
NC_011601:3951324:396771639677163968156441Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein3e-82303
NC_006905:3780000:378069237806923781132441Salmonella enterica subsp. enterica serovar Choleraesuis strputative acetyltransferase2e-48190
NC_015968:204969:207259207259207705447Enterobacter asburiae LF7a chromosome, complete genomeGCN5-like N-acetyltransferase4e-46183
NC_015224:4473230:448095644809564481420465Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein3e-28123
NC_012580:301500:324264324264324692429Vibrio cholerae M66-2 chromosome II, complete sequenceN-acetyltransferase GCN51e-24112
NC_006512:1942000:194865519486551949080426Idiomarina loihiensis L2TR, complete genomeAcetyltransferase, GNAT family3e-22103
NC_014364:4488875:451879045187904519227438Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeGCN5-related N-acetyltransferase9e-22102
NC_004459:2443000:248694924869492487374426Vibrio vulnificus CMCP6 chromosome I, complete sequenceProbable acetyltransferase4e-21100
NC_015589:2480365:249378124937812494209429Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeGCN5-like N-acetyltransferase3e-1993.6
NC_007930:50801:549615496155395435Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,Acetyltransferase5e-1992.8
NC_011901:2739984:274774227477422748170429Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeacetyltransferase2e-1890.9
NC_014532:2268078:228499522849952285420426Halomonas elongata DSM 2581, complete genomeacetyltransferase (GNAT) family protein1e-1788.2
NC_007493:628243:633935633935634387453Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencepossible acetyltransferase7e-1475.9
NC_012796:3600630:360653936065393607027489Desulfovibrio magneticus RS-1, complete genomeputative acetyltransferase7e-1165.9
NC_021177:7870464:788150478815047881953450Streptomyces fulvissimus DSM 40593, complete genomeGCN5-related N-acetyltransferase9e-1165.5
NC_016446:49618:884128841288837426Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein3e-1063.9
NC_012667:931390:997950997950998444495Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein4e-1063.5
NC_015663:3742738:375758637575863758029444Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative acetyltransferase8e-1062.4
NC_012583:361241:393915393915394340426Vibrio cholerae O395 chromosome chromosome II, complete sequenceGCN5-related N-acetyltransferase1e-0962
NC_009456:787322:869602869602870027426Vibrio cholerae O395 chromosome 1, complete sequenceGNAT family acetyltransferase1e-0962
NC_017269:303500:306386306386306811426Vibrio cholerae LMA3984-4 chromosome II, complete sequenceacetyltransferase (putative)1e-0962
NC_012583:361241:379172379172379597426Vibrio cholerae O395 chromosome chromosome II, complete sequenceGCN5-related N-acetyltransferase1e-0962
NC_012580:353273:364469364469364894426Vibrio cholerae M66-2 chromosome II, complete sequenceN-acetyltransferase GCN51e-0962
NC_020181:1653261:166020816602081660651444Enterobacter aerogenes EA1509E, complete genomeHistone acetyltransferase HPA2 and related acetyltransferases2e-0961.2
NC_008253:1228485:123434612343461234783438Escherichia coli 536, complete genomehypothetical acetyltransferase YjaB4e-0960.1
NC_013941:733286:745846745846746283438Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein4e-0960.1
NC_016816:4129299:414248741424874142930444Pantoea ananatis LMG 5342, complete genomeGNAT family acetyltransferase6e-0959.7
NC_013892:3745749:375004337500433750477435Xenorhabdus bovienii SS-2004 chromosome, complete genomeacyltransferase1e-0858.9
NC_020260:1111130:112615711261571126597441Cronobacter sakazakii Sp291, complete genomeGCN5-related N-acetyltransferase3e-0857.4
NC_009778:1070000:108406910840691084509441Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-0857
NC_015968:74124:813988139881835438Enterobacter asburiae LF7a chromosome, complete genomeGCN5-like N-acetyltransferase3e-0754.3
NC_014006:1204500:121133112113311211777447Sphingobium japonicum UT26S chromosome 1, complete genomeputative acetyltransferase5e-0753.1
NC_015593:203000:209793209793210242450Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeGCN5-like N-acetyltransferase1e-0652
NC_020409:2856481:288785528878552888301447Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeUncharacterized N-acetyltransferase yjaB3e-0650.8