Pre_GI: BLASTP Hits

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Query: NC_008150:1705152:1740319 Yersinia pestis Antiqua, complete genome

Start: 1740319, End: 1740564, Length: 246

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from the Republic of Congo. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:1765399:178349317834931783747255Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-43173
NC_017168:3290380:329379932937993294044246Yersinia pestis A1122 chromosome, complete genomehypothetical protein6e-43172
NC_009708:2245586:225030122503012250546246Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein6e-43172
NC_009381:1064227:106826810682681068513246Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein6e-43172
NC_010465:2282874:228758922875892287834246Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein6e-43172
NC_008149:1842500:187698018769801877225246Yersinia pestis Nepal516, complete genomehypothetical protein6e-43172
NC_014844:1818939:184441618444161844694279Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehypothetical protein3e-1683.6
NC_011146:2200142:223926722392672239587321Geobacter bemidjiensis Bem, complete genomehypothetical protein1e-1582
NC_009720:670853:682928682928683164237Xanthobacter autotrophicus Py2, complete genome2e-1374.7
NC_014314:1148000:115171911517191152138420Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehypothetical protein2e-0857.8
NC_010338:3743000:379125637912563791561306Caulobacter sp. K31, complete genomehypothetical protein9e-0752.4
NC_014375:217612:237992237992238288297Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomehypothetical protein2e-0651.2
NC_015565:1075693:107771910777191078009291Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein2e-0650.8