Pre_GI: BLASTP Hits

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Query: NC_008148:672608:688360 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 688360, End: 689172, Length: 813

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016803:593484:611289611289612098810Desulfovibrio desulfuricans ND132 chromosome, complete genomezinc/iron permease8e-63240
NC_014507:2319842:234155923415592342371813Methanoplanus petrolearius DSM 11571 chromosome, complete genomezinc/iron permease2e-59229
NC_010001:902506:925284925284926060777Clostridium phytofermentans ISDg, complete genomezinc/iron permease2e-39162
NC_015977:2280834:228725522872552288037783Roseburia hominis A2-183 chromosome, complete genomezinc/iron permease6e-38157
NC_010673:205500:223038223038223859822Borrelia hermsii DAH, complete genomezinc uptake transporter2e-35149
NC_019978:416637:419438419438420217780Halobacteroides halobius DSM 5150, complete genomeputative divalent heavy-metal cations transporter6e-25114
NC_012785:20454:204542045421197744Kosmotoga olearia TBF 19.5.1, complete genomezinc/iron permease4e-23108
NC_011899:12699:186261862619411786Halothermothrix orenii H 168, complete genomezinc/iron permease1e-22106
NC_012883:1695703:169905216990521699861810Thermococcus sibiricus MM 739, complete genomeHeavy-metal cation transporter, ZIP family2e-22106
NC_014205:1257652:128131112813111282114804Staphylothermus hellenicus DSM 12710 chromosome, complete genomezinc/iron permease8e-22104
NC_009718:643200:665200665200665940741Fervidobacterium nodosum Rt17-B1, complete genomezinc/iron permease2e-21102
NC_008570:1852286:186963918696391870571933Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeGufA protein1e-20100
NC_014010:1020488:106354110635411064242702Candidatus Puniceispirillum marinum IMCC1322 chromosome, completehypothetical protein9e-21100
NC_010730:813534:814713814713815498786Sulfurihydrogenibium sp. YO3AOP1, complete genomezinc/iron permease3e-2099.4
NC_011653:1339868:135111113511111351851741Thermosipho africanus TCF52B, complete genomeGufA protein4e-2099
NC_007492:3180480:321308732130873214016930Pseudomonas fluorescens PfO-1, complete genomeZinc transporter ZIP6e-1994.7
NC_015740:2614317:264084926408492641781933Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein3e-1892.4
NC_015424:1603000:162608816260881627020933Aeromonas veronii B565 chromosome, complete genomeputative divalent heavy-metal cations transporter5e-1891.7
NC_015931:857327:871657871657872433777Pyrolobus fumarii 1A, complete genomezinc/iron permease6e-1374.7
NC_015954:2289717:229681022968102297286477Halophilic archaeon DL31 chromosome, complete genome4e-1272
NC_016612:627118:631601631601632371771Klebsiella oxytoca KCTC 1686 chromosome, complete genomezinc transporter ZupT5e-1065.1
NC_011750:3683760:368819536881953688968774Escherichia coli IAI39 chromosome, complete genomezinc transporter ZupT2e-0859.7
NC_009348:2836969:283696928369692837745777Aeromonas salmonicida subsp. salmonicida A449, complete genomedivalent heavy-metal cations transporter2e-0859.7
NC_015948:334000:358506358506359318813Haloarcula hispanica ATCC 33960 chromosome chromosome I, completemetal transporter family GufA protein3e-0858.9
NC_013202:1144192:117285311728531173656804Halomicrobium mukohataei DSM 12286, complete genomezinc/iron permease1e-0757
NC_011745:3627438:363322836332283634001774Escherichia coli ED1a chromosome, complete genomezinc transporter ZupT2e-0653.5
NC_010468:694943:711247711247712020774Escherichia coli ATCC 8739, complete genomezinc/iron permease2e-0653.5
CP002516:693703:708683708683709456774Escherichia coli KO11, complete genomezinc/iron permease2e-0653.5
CP002185:3393813:339661933966193397392774Escherichia coli W, complete genomezinc transporter2e-0653.5
AP010958:3787991:379326037932603794033774Escherichia coli O103:H2 str. 12009 DNA, complete genomezinc transporter2e-0653.5
NC_000913:3176000:318057231805723181345774Escherichia coli K12, complete genomezinc transporter ZupT2e-0653.5
AC_000091:3180275:318120631812063181979774Escherichia coli W3110 DNA, complete genomezinc transporter2e-0653.5
CU928145:3529930:353264035326403533413774Escherichia coli 55989 chromosome, complete genomezinc transporter2e-0653.5
NC_009801:3511444:351357335135733514346774Escherichia coli E24377A, complete genomezinc transporter ZupT2e-0653.5
NC_009800:3224575:322738132273813228154774Escherichia coli HS, complete genomezinc transporter ZupT2e-0653.5
CU928160:3263248:326537732653773266150774Escherichia coli IAI1 chromosome, complete genomezinc transporter2e-0653.5
NC_010473:3273882:327831732783173279090774Escherichia coli str. K-12 substr. DH10B, complete genomezinc transporter2e-0653.5
NC_011415:3443851:344665734466573447430774Escherichia coli SE11 chromosome, complete genomezinc transporter ZupT2e-0653.5
NC_016902:693703:708683708683709456774Escherichia coli KO11FL chromosome, complete genomezinc/iron permease2e-0653.5
NC_016822:3485631:349006634900663490839774Shigella sonnei 53G, complete genomezinc transporter ZupT2e-0653.5
NC_013364:3840000:384451738445173845290774Escherichia coli O111:H- str. 11128, complete genomezinc transporter2e-0653.5
NC_013361:4102894:410570041057004106473774Escherichia coli O26:H11 str. 11368 chromosome, complete genomezinc transporter ZupT2e-0653.5
NC_013353:3787991:379326037932603794033774Escherichia coli O103:H2 str. 12009, complete genomezinc transporter2e-0653.5
NC_012967:3113768:311672231167223117495774Escherichia coli B str. REL606 chromosome, complete genomezinc transporter ZupT2e-0653.5
NC_012947:708064:723044723044723817774Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completezinc transporter ZupT2e-0653.5
NC_012759:3063285:306772030677203068493774Escherichia coli BW2952 chromosome, complete genomezinc transporter ZupT2e-0653.5
NC_011741:3263248:326537732653773266150774Escherichia coli IAI1 chromosome, complete genomezinc transporter ZupT2e-0653.5
NC_011748:3529930:353264035326403533413774Escherichia coli 55989, complete genomezinc transporter ZupT2e-0653.5