Pre_GI: BLASTP Hits

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Query: NC_008148:258292:274071 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 274071, End: 274559, Length: 489

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013526:567500:579081579081579578498Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated protein Cas49e-43172
NC_015589:3053504:306256030625603063066507Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeCRISPR-associated protein Cas42e-31134
NC_014915:332784:346954346954347463510Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated protein Cas44e-31133
NC_015387:2072237:208160920816092082127519Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein Cas43e-29127
NC_019897:3251639:328650232865023287020519Thermobacillus composti KWC4 chromosome, complete genomeCRISPR-associated protein Cas41e-28125
NC_014209:2204515:220833822083382208835498Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated protein Cas41e-28125
NC_011296:1039749:107237610723761072879504Thermodesulfovibrio yellowstonii DSM 11347, complete genomeCRISPR-associated protein Cas44e-28123
NC_017161:1117741:112619211261921126698507Hydrogenobacter thermophilus TK-6 chromosome, complete genomeCRISPR-associated exonuclease, Cas4 family6e-25113
NC_013799:1117750:112633411263341126840507Hydrogenobacter thermophilus TK-6, complete genomeCRISPR-associated exonuclease6e-25113
NC_015757:2343193:237269823726982373210513Sulfobacillus acidophilus TPY chromosome, complete genomeCRISPR-associated protein Cas48e-25112
NC_016884:3219030:325076832507683251280513Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeCRISPR-associated exonuclease, Cas4 family8e-25112
NC_021184:823000:830924830924831430507Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated protein Cas44e-24110
NC_009718:1024000:103147610314761031967492Fervidobacterium nodosum Rt17-B1, complete genomeCRISPR-associated Cas4 family protein3e-22104
NC_010003:2056000:207511620751162075628513Petrotoga mobilis SJ95, complete genomeCRISPR-associated protein Cas47e-22102
NC_013926:974668:979781979781980266486Aciduliprofundum boonei T469 chromosome, complete genomeCRISPR-associated protein Cas43e-2097.4
NC_019942:1370872:137681713768171377323507Aciduliprofundum sp. MAR08-339, complete genomeCRISPR-associated protein Cas46e-1889.7
NC_007681:482445:488317488317488814498Methanosphaera stadtmanae DSM 3091, complete genomepredicted exonuclease9e-1682.8
NC_000961:135493:153401153401153889489Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-1581.6
NC_012440:1249941:126312012631201263632513Persephonella marina EX-H1, complete genomecrispr-associated protein Cas46e-1579.7
NC_000918:246792:246281246281246814534Aquifex aeolicus VF5, complete genomehypothetical protein1e-1375.9
NC_000916:983500:100064310006431001170528Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein1e-1272.4
NC_014206:1467000:147714614771461477643498Geobacillus sp. C56-T3 chromosome, complete genomeCRISPR-associated protein Cas42e-1271.6
NC_002950:2098454:210559221055922106104513Porphyromonas gingivalis W83, complete genomeCRISPR-associated protein Cas44e-1270.9
NC_021184:504728:527639527639528124486Desulfotomaculum gibsoniae DSM 7213, complete genomeRecB family exonuclease5e-1270.1
NC_011978:699500:711549711549712067519Thermotoga neapolitana DSM 4359, complete genomeCRISPR-associated exonuclease, Cas4 family1e-1168.9
NC_013501:1881692:189948418994841900026543Rhodothermus marinus DSM 4252, complete genomeCRISPR-associated protein Cas48e-1166.2
NC_010803:483713:499042499042499542501Chlorobium limicola DSM 245, complete genomeCRISPR-associated protein Cas49e-1166.2
NC_015966:1316901:132550513255051326047543Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeCRISPR-associated protein Cas41e-1065.9
NC_014935:1047411:106079910607991061296498Nitratifractor saLSUginis DSM 16511 chromosome, complete genomecrispr-associated exonuclease, cas4 family1e-1065.9
NC_015865:685882:698981698981699493513Thermococcus sp. 4557 chromosome, complete genomeCRISPR-associated protein Cas42e-1065.1
NC_007955:1198994:121052612105261211125600Methanococcoides burtonii DSM 6242, complete genomeCRISPR-associated protein Cas42e-1065.1
NC_009715:873280:880351880351880848498Campylobacter curvus 525.92 chromosome, complete genomeCRISPR-associated protein Cas47e-1063.2
NC_020134:1783000:179073617907361791239504Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated protein Cas46e-1063.2
NC_015680:841783:847106847106847621516Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated protein Cas49e-1062.8
NC_016051:460624:468237468237468773537Thermococcus sp. AM4 chromosome, complete genomeCRISPR-associated RecB family exonuclease Cas4a1e-0962.4
NC_014150:1423758:142606014260601426563504Brachyspira murdochii DSM 12563 chromosome, complete genomeCRISPR-associated protein Cas42e-0961.6
NC_014624:140000:147799147799148293495Eubacterium limosum KIST612 chromosome, complete genomeCRISPR-associated protein Cas42e-0961.6
NC_009486:1103915:111150711115071112025519Thermotoga petrophila RKU-1 chromosome, complete genomeCRISPR-associated Cas4 family protein3e-0961.2
NC_016609:5986500:599181659918165992322507Niastella koreensis GR20-10 chromosome, complete genomeCRISPR-associated exonuclease, Cas4 family6e-0960.1
NC_015975:1056731:107010810701081070596489Lactobacillus ruminis ATCC 27782 chromosome, complete genomeCRISPR-associated protein Cas42e-0858.5
NC_017096:260333:267628267628268137510Caldisericum exile AZM16c01, complete genomeputative CRISPR-associated protein2e-0755.1
NC_013216:921377:930256930256930744489Desulfotomaculum acetoxidans DSM 771, complete genomeCRISPR-associated protein Cas44e-0753.9
NC_007681:1082000:108938810893881089909522Methanosphaera stadtmanae DSM 3091, complete genomepredicted RecB family exonuclease7e-0753.1