Pre_GI: BLASTP Hits

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Query: NC_007953:938346:953810 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 953810, End: 955222, Length: 1413

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015499:1493500:1504803150480315061101308Thermodesulfobium narugense DSM 14796 chromosome, complete genomePhenylacetate--CoA ligase3e-39163
NC_013849:1034472:1056461105646110577561296Ferroglobus placidus DSM 10642 chromosome, complete genomeAMP-dependent synthetase and ligase2e-38160
NC_003552:4714457:4734881473488147361851305Methanosarcina acetivorans C2A, complete genomecoenzyme F390 synthetase1e-37158
NC_013890:808791:8136918136918150101320Dehalococcoides sp. GT chromosome, complete genomePhenylacetate--CoA ligase8e-35148
NC_015275:4577642:4586034458603445873501317Clostridium lentocellum DSM 5427 chromosome, complete genomePhenylacetate--CoA ligase1e-34148
NC_009712:669647:6737836737836750541272Candidatus Methanoregula boonei 6A8, complete genomephenylacetate--CoA ligase4e-34146
NC_011979:3045952:3065023306502330663271305Geobacter sp. FRC-32, complete genomePhenylacetate--CoA ligase3e-34146
NC_009483:2489000:2490625249062524919291305Geobacter uraniireducens Rf4 chromosome, complete genomephenylacetate--CoA ligase7e-34145
NC_009712:669647:6724826724826737831302Candidatus Methanoregula boonei 6A8, complete genomephenylacetate--CoA ligase7e-34145
NC_015499:1493500:1500640150064015019441305Thermodesulfobium narugense DSM 14796 chromosome, complete genomePhenylacetate--CoA ligase3e-33143
NC_014253:575360:5820365820365833371302Methanohalobium evestigatum Z-7303 chromosome, complete genomePhenylacetate--CoA ligase9e-33141
NC_020409:363114:3655483655483668521305Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completePhenylacetate-coenzyme A ligase2e-32140
NC_013741:302415:3191133191133203631251Archaeoglobus profundus DSM 5631, complete genomePhenylacetate--CoA ligase6e-32139
NC_018876:2604055:2617254261725426185581305Methanolobus psychrophilus R15 chromosome, complete genomephenylacetate-CoA ligase1e-31137
NC_016627:1960097:1982156198215619834601305Clostridium clariflavum DSM 19732 chromosome, complete genomecoenzyme F390 synthetase1e-31137
NC_016627:3158353:3166226316622631675451320Clostridium clariflavum DSM 19732 chromosome, complete genomecoenzyme F390 synthetase1e-30134
NC_002570:207555:2130302130302143671338Bacillus halodurans C-125, complete genomephenylacetyl-CoA ligase in the phenylacetic acid catabolic pathway2e-30134
NC_013204:74855:7619876198774391242Eggerthella lenta DSM 2243, complete genomePhenylacetate--CoA ligase3e-30133
NC_011979:3070110:3072583307258330738871305Geobacter sp. FRC-32, complete genomePhenylacetate--CoA ligase6e-30132
NC_011894:3475775:3482117348211734834481332Methylobacterium nodulans ORS 2060, complete genomephenylacetate-CoA ligase3e-29130
NC_015500:2329957:2352706235270623540281323Treponema brennaborense DSM 12168 chromosome, complete genomePhenylacetate--CoA ligase1e-28128
NC_015499:1640500:1654187165418716554491263Thermodesulfobium narugense DSM 14796 chromosome, complete genomePhenylacetate--CoA ligase1e-28127
NC_013170:311045:3116743116743129121239Cryptobacterium curtum DSM 15641, complete genomephenylacetate-CoA ligase2e-28127
NC_008148:1859888:1867573186757318688951323Rubrobacter xylanophilus DSM 9941, complete genomePhenylacetate--CoA ligase3e-28126
NC_015578:2026741:2074357207435720757031347Treponema primitia ZAS-2 chromosome, complete genomephenylacetate-coenzyme A ligase5e-28125
NC_017272:921193:9211939211939225271335Thermus thermophilus SG0.5JP17-16 chromosome, complete genomephenylacetate--CoA ligase7e-28125
NC_015638:1824794:1844428184442818457141287Lacinutrix sp. 5H-3-7-4 chromosome, complete genomePhenylacetate--CoA ligase9e-28125
NC_015656:3200500:3211392321139232127711380Frankia symbiont of Datisca glomerata chromosome, complete genomePhenylacetate--CoA ligase9e-27121
NC_016629:415711:4356054356054368971293Desulfovibrio africanus str. Walvis Bay chromosome, completephenylacetate--CoA ligase1e-26121
NC_016027:2512297:2534465253446525357931329Gluconacetobacter xylinus NBRC 3288, complete genomephenylacetate-CoA ligase7e-25115
NC_020302:3014483:3038969303896930402821314Corynebacterium halotolerans YIM 70093 = DSM 44683, completephenylacetate-CoA ligase2e-24114
NC_015733:2963548:2985941298594129872601320Pseudomonas putida S16 chromosome, complete genomephenylacetate-CoA ligase4e-23109
NC_008699:2260606:2277546227754622789641419Nocardioides sp. JS614, complete genomePhenylacetate--CoA ligase4e-23109
NC_014228:4408500:4419780441978044211231344Xenorhabdus nematophila ATCC 19061, complete genomephenylacetyl-CoA ligase, phenylacetic acid degradation1e-22108
NC_014722:1084616:1084616108461610859231308Burkholderia rhizoxinica HKI 454, complete genomeCoenzyme F390 Synthetase / phenylacetate-coenzyme A ligase3e-22107
NC_015422:1694363:1718192171819217195531362Alicycliphilus denitrificans K601 chromosome, complete genomePhenylacetate--CoA ligase4e-21102
NC_018691:896464:9006069006069019011296Alcanivorax dieselolei B5 chromosome, complete genomePhenylacetate-CoA ligase1e-20101
NC_013892:114884:1197261197261210331308Xenorhabdus bovienii SS-2004 chromosome, complete genomephenylacetyl-CoA ligase, phenylacetic acid degradation8e-2099
NC_008148:1859888:1876471187647118778201350Rubrobacter xylanophilus DSM 9941, complete genomePhenylacetate--CoA ligase1e-1997.8
NC_017276:2391645:2410071241007124113781308Sulfolobus islandicus REY15A chromosome, complete genomephenylacetate--CoA ligase5e-1996.3
NC_012588:2483000:2499134249913425004411308Sulfolobus islandicus M.14.25 chromosome, complete genomephenylacetate--CoA ligase5e-1996.3
NC_012632:2564801:2583227258322725845341308Sulfolobus islandicus M.16.27 chromosome, complete genomephenylacetate--CoA ligase5e-1996.3
NC_012726:2461102:2479528247952824808351308Sulfolobus islandicus M.16.4 chromosome, complete genomephenylacetate--CoA ligase6e-1995.9
NC_012622:2571812:2590640259064025919471308Sulfolobus islandicus Y.G.57.14 chromosome, complete genomephenylacetate--CoA ligase6e-1995.9
NC_012589:2605085:2621829262182926231361308Sulfolobus islandicus L.S.2.15, complete genomePhenylacetate--CoA ligase6e-1995.9
NC_017275:2519637:2538063253806325393701308Sulfolobus islandicus HVE10/4 chromosome, complete genomephenylacetate-CoA ligase7e-1995.5
NC_009943:970901:9719049719049731991296Candidatus Desulfococcus oleovorans Hxd3, complete genomePhenylacetate--CoA ligase9e-1995.1
NC_014844:3469848:3475669347566934769341266Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeAMP-dependent synthetase and ligase4e-1893.2
NC_016803:2431672:2436907243690724381721266Desulfovibrio desulfuricans ND132 chromosome, complete genomeAMP-dependent synthetase and ligase5e-1892.8
NC_012623:2680601:2697343269734326986501308Sulfolobus islandicus Y.N.15.51 chromosome, complete genomephenylacetate--CoA ligase5e-1892.8
NC_016610:795903:8005968005968019151320Tannerella forsythia ATCC 43037 chromosome, complete genomehypothetical protein3e-1790.1
NC_015733:2658337:2699616269961627009591344Pseudomonas putida S16 chromosome, complete genomephenylacetate-CoA ligase7e-1685.9
NC_016885:1153277:1162327116232711636311305Pyrobaculum oguniense TE7 chromosome, complete genomeCoenzyme F390 synthetase2e-1584
NC_014623:7482229:7496365749636574976961332Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephenylacetate-CoA ligase8e-1582
NC_014931:6203872:6208513620851362097571245Variovorax paradoxus EPS chromosome, complete genomeAMP-dependent synthetase and ligase3e-1480.1
NC_011297:415760:4297774297774311471371Dictyoglomus thermophilum H-6-12, complete genomecapsular polysaccharide biosynthesis protein1e-1378.2
NC_009092:3057319:3070906307090630721321227Shewanella loihica PV-4, complete genomeputative phenylacetate-coenzyme A ligase1e-1377.8
NC_013093:1036772:1062951106295110642551305Actinosynnema mirum DSM 43827, complete genomePhenylacetate--CoA ligase2e-1377
NC_021184:3912805:3924377392437739257111335Desulfotomaculum gibsoniae DSM 7213, complete genomecoenzyme F390 synthetase4e-1376.3
NC_009051:657000:6658626658626671421281Methanoculleus marisnigri JR1, complete genomeCapK related-protein8e-1375.5
NC_002754:2391867:2392154239215423931731020Sulfolobus solfataricus P2, complete genomeCoA-ligase / coenzyme F390 synthetase, putative8e-1375.5
NC_006513:1379735:1412255141225514136491395Azoarcus sp. EbN1, complete genomepossible benzoylacetate-CoA ligase1e-1275.1
NC_007517:2241104:2245505224550522469681464Geobacter metallireducens GS-15, complete genomeCapK related-protein1e-1274.7
NC_014328:2643588:2651432265143226527451314Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative AMP-binding protein1e-1274.7
NC_003552:1259356:1272835127283512741721338Methanosarcina acetivorans C2A, complete genomecapsular polysaccharide biosynthesis protein2e-1274.3
NC_009142:1242850:1244426124442612457481323Saccharopolyspora erythraea NRRL 2338, complete genomephenylacetate-coenzyme A ligase4e-1273.2
NC_019673:1039258:1059925105992510613011377Saccharothrix espanaensis DSM 44229 complete genomePhenylacetate-CoA ligase5e-1272.8
NC_013216:3625830:3632210363221036336131404Desulfotomaculum acetoxidans DSM 771, complete genomecoenzyme F390 synthetase-like protein1e-1171.6
NC_007517:1998342:2014298201429820156501353Geobacter metallireducens GS-15, complete genomeCoenzyme F390 synthetase-like2e-1171.2
NC_008786:3045770:3063888306388830651291242Verminephrobacter eiseniae EF01-2, complete genomeputative phenylacetate-CoA ligase2e-1171.2
NC_014623:7482229:7498478749847874997371260Stigmatella aurantiaca DW4/3-1 chromosome, complete genomecoenzyme f390 synthetase2e-1170.5
NC_008554:1623041:1624450162445016257781329Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein3e-1170.5
NC_002939:2124642:2144092214409221454531362Geobacter sulfurreducens PCA, complete genomecapK related-protein1e-1068.2
NC_019977:1456366:1469437146943714707231287Methanomethylovorans hollandica DSM 15978, complete genomecoenzyme F390 synthetase6e-1065.9
NC_014551:2510000:2525555252555525268771323Bacillus amyloliquefaciens DSM 7, complete genomeCoenzyme F390 synthetase1e-0964.7
NC_012654:18893:3274132741340061266Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequencephenylacetate--CoA ligase6e-0962.4
NC_015635:932240:9510649510649524371374Microlunatus phosphovorus NM-1, complete genomehypothetical protein8e-0962
NC_015656:4850833:4865121486512148665211401Frankia symbiont of Datisca glomerata chromosome, complete genomeAMP-dependent synthetase and ligase1e-0862
NC_006138:273237:2836552836552849561302Desulfotalea psychrophila LSv54, complete genomesimilar to coenzyme F390 synthetase2e-0860.5
NC_007759:415456:4336014336014350731473Syntrophus aciditrophicus SB, complete genomecoenzyme F390 Synthetase / phenylacetate-coenzyme A ligase3e-0860.5
NC_020409:1956485:1963804196380419651141311Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeRelated to coenzyme F390 synthetase4e-0859.7
NC_012214:124337:1328071328071341891383Erwinia pyrifoliae Ep1/96, complete genomeCapK protein9e-0858.9
NC_011987:362997:3802863802863815841299Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequencecoenzyme F390 synthetase3e-0653.9