Pre_GI: BLASTP Hits

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Query: NC_007952:3283394:3304952 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3304952, End: 3305554, Length: 603

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011146:2485625:250398125039812504583603Geobacter bemidjiensis Bem, complete genomephosphoesterase PA-phosphatase related7e-49193
NC_015136:912276:925323925323925925603Burkholderia sp. CCGE1001 chromosome 1, complete sequencephosphoesterase PA-phosphatase-like protein1e-47189
NC_011000:2732330:275831927583192758915597Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative transport permease4e-30130
NC_007973:3240866:325787532578753258471597Ralstonia metallidurans CH34 chromosome 1, complete sequencephosphoesterase, PA-phosphatase related6e-30130
NC_020064:1611820:161728816172881617893606Serratia marcescens FGI94, complete genomePAP2 superfamily protein3e-28125
NC_016612:3361802:336391733639173364510594Klebsiella oxytoca KCTC 1686 chromosome, complete genomeundecaprenyl pyrophosphate phosphatase3e-27121
NC_015061:2770856:278842927884292789034606Rahnella sp. Y9602 chromosome, complete genomeUndecaprenyl-diphosphatase2e-27121
NC_016845:1773416:177341617734161774009594Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,undecaprenyl pyrophosphate phosphatase9e-27119
NC_009436:1466580:146658014665801467188609Enterobacter sp. 638, complete genomeundecaprenyl pyrophosphate phosphatase6e-26117
NC_011601:846358:847174847174847770597Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeundecaprenyl pyrophosphate phosphatase2e-25115
NC_012779:2424967:243772324377232438331609Edwardsiella ictaluri 93-146, complete genomeputative undecaprenyl-diphosphatase YbjG1e-25115
NC_012947:2898179:291507829150782915674597Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeUDP pyrophosphate phosphatase6e-25114
NC_011274:896802:914373914373914981609Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91undecaprenyl pyrophosphate phosphatase2e-24112
NC_011083:967260:984841984841985449609Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative undecaprenyl-diphosphatase YbjG2e-24112
NC_010102:2178594:218013921801392180747609Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-24112
NC_011205:944125:961710961710962318609Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853undecaprenyl pyrophosphate phosphatase2e-24112
NC_003197:920000:937574937574938182609Salmonella typhimurium LT2, complete genomeputative permease1e-24112
NC_016810:919266:936835936835937443609Salmonella enterica subsp. enterica serovar Typhimurium strputative permease1e-24112
NC_016831:2108557:211010221101022110710609Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative permease1e-24112
NC_016856:921057:938626938626939234609Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sundecaprenyl pyrophosphate phosphatase1e-24112
NC_016863:920346:937915937915938523609Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1undecaprenyl pyrophosphate phosphatase1e-24112
NC_016857:919266:936835936835937509675Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative undecaprenyl-diphosphatase YbjG1e-24112
NC_016860:959609:977178977178977852675Salmonella enterica subsp. enterica serovar Typhimurium strundecaprenyl pyrophosphate phosphatase1e-24112
NC_017046:919249:936817936817937491675Salmonella enterica subsp. enterica serovar Typhimurium str. 798permease1e-24112
NC_011294:878896:896466896466897074609Salmonella enterica subsp. enterica serovar Enteritidis strundecaprenyl pyrophosphate phosphatase1e-24112
NC_006905:946418:965321965321965995675Salmonella enterica subsp. enterica serovar Choleraesuis strputative permease2e-24111
NC_011080:924326:941908941908942582675Salmonella enterica subsp. enterica serovar Newport str. SL254,putative undecaprenyl-diphosphatase YbjG2e-24111
NC_012125:894955:912525912525913199675Salmonella enterica subsp. enterica serovar Paratyphi C strainUDP pyrophosphate phosphatase2e-24111
NC_011094:973140:990704990704991378675Salmonella enterica subsp. enterica serovar Schwarzengrund strUDP pyrophosphate phosphatase2e-23108
NC_013508:2356865:237729823772982377906609Edwardsiella tarda EIB202, complete genomeundecaprenyl-diphosphatase2e-23108
NC_009075:15017:182831828318879597Burkholderia pseudomallei 668 chromosome II, complete sequencePAP2 family protein9e-1786.7
NC_010515:1491590:150858415085841509165582Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencephosphoesterase PA-phosphatase related8e-1683.6
NC_021182:1761789:178148317814831782079597Clostridium pasteurianum BC1, complete genomemembrane-associated phospholipid phosphatase1e-0756.2