Pre_GI: BLASTP Hits

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Query: NC_007952:1934249:1934249 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 1934249, End: 1935196, Length: 948

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018012:1628364:162870816287081629664957Thiocystis violascens DSM 198 chromosome, complete genomeATPase family protein associated with various cellular activities (AAA)2e-29130
NC_015572:4063150:409660940966094097568960Methylomonas methanica MC09 chromosome, complete genomeCobaltochelatase8e-28124
NC_007519:3391090:3397113339711333981291017Desulfovibrio alaskensis G20 chromosome, complete genomeATPase4e-26119
NC_018012:598724:602193602193603155963Thiocystis violascens DSM 198 chromosome, complete genomeATPase family protein associated with various cellular activities (AAA)6e-26118
NC_015578:3495034:3516109351610935172841176Treponema primitia ZAS-2 chromosome, complete genomeATPase, AAA family1e-25117
NC_015563:5289875:530914553091455310122978Delftia sp. Cs1-4 chromosome, complete genomecobaltochelatase1e-25117
NC_017506:93494:138421138421139380960Marinobacter adhaerens HP15 chromosome, complete genomeCobS protein2e-25116
NC_010554:2646806:267330426733042674263960Proteus mirabilis HI4320, complete genomeplasmid-related ATPase5e-25115
NC_014414:2467639:247114224711422472137996Parvularcula bermudensis HTCC2503 chromosome, complete genomecobalamin biosynthesis protein4e-24112
NC_002937:2068117:211697921169792117953975Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completecobS protein, putative8e-24111
NC_007205:424500:446380446380447354975Candidatus Pelagibacter ubique HTCC1062, complete genomeCobalamin biosynthesis protein CobS4e-22105
NC_008011:213386:232791232791233741951Lawsonia intracellularis PHE/MN1-00, complete genomeMoxR-like ATPases3e-21102
NC_002939:2315402:237207423720742373015942Geobacter sulfurreducens PCA, complete genomecobS protein, putative5e-21102
NC_002939:2337402:237207423720742373015942Geobacter sulfurreducens PCA, complete genomecobS protein, putative5e-21102
NC_013201:28381:474764747648402927Halomicrobium mukohataei DSM 12286 plasmid pHmuk01, completeATPase associated with various cellular activities AAA_54e-1789
NC_020409:135699:151335151335151934600Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeATPase (fragment)9e-1787.8
NC_013173:1356526:1396908139690813994752568Desulfomicrobium baculatum DSM 4028, complete genomeATPase associated with various cellular activities AAA_51e-1480.5
NC_008609:1976403:203808920380892039075987Pelobacter propionicus DSM 2379, complete genomeATPase associated with various cellular activities, AAA_52e-1377
NC_004838:51013:8753987539887741236Yersinia pestis KIM plasmid pMT-1, complete sequenceputative porphyrin biosynthetic enzyme2e-1376.6
NC_008118:56777:6048260482617171236Yersinia pestis Nepal516 plasmid pMT, complete sequenceporphyrin biosynthetic protein2e-1376.6
NC_005815:61148:6681266812680471236Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completeputative porphyrin biosynthetic protein2e-1376.6
NC_009378:62215:6592065920671551236Yersinia pestis Pestoides F plasmid MT, complete sequenceporphyrin biosynthetic protein2e-1376.6
NC_011761:1904637:190850419085041909322819Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeCbbQ protein2e-1066.6
NC_011206:1792621:179415017941501794968819Acidithiobacillus ferrooxidans ATCC 53993, complete genomeCbbQ/NirQ/NorQ domain protein2e-1066.6
NC_015563:3571682:357450835745083575365858Delftia sp. Cs1-4 chromosome, complete genomeATPase2e-0963.5
NC_015942:787808:793384793384794211828Acidithiobacillus ferrivorans SS3 chromosome, complete genomeATPase2e-0963.5
NC_013929:3722867:3724522372452237256641143Streptomyces scabiei 87.22 chromosome, complete genomeATPase2e-0963.2
NC_015172:775128:7834147834147849491536Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeATPase associated with various cellular activities AAA_56e-0961.6
NC_003888:7561923:7635675763567576368831209Streptomyces coelicolor A3(2), complete genomeregulatory protein2e-0860.5
NC_020388:693479:7275757275757286031029Natronomonas moolapensis 8.8.11 complete genomegas-vesicle operon protein GvpN2e-0860.5
NC_015379:2575000:257888525788852579700816Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Denitrification regulatory protein3e-0859.7
NC_013791:1507943:151616515161651517082918Bacillus pseudofirmus OF4 chromosome, complete genomegas vesicle protein GvpN3e-0859.7
NC_016830:4010637:403641140364114037226816Pseudomonas fluorescens F113 chromosome, complete genomedenitrification regulatory protein3e-0859.3
NC_008344:811386:831516831516832352837Nitrosomonas eutropha C91, complete genomeCbbQ/NirQ/NorQ C-terminal domain protein5e-0858.9
NC_017138:1812000:182032018203201821246927Bacillus megaterium WSH-002 chromosome, complete genomegas vesicle protein GvpN6e-0858.5
NC_014019:3213599:322110832211083222034927Bacillus megaterium QM B1551 chromosome, complete genomegas vesicle protein GvpN6e-0858.5
NC_014103:3212839:322035132203513221277927Bacillus megaterium DSM319 chromosome, complete genomegas vesicle protein GvpN7e-0858.2
NC_016582:10137951:101479391014793910148754816Streptomyces bingchenggensis BCW-1 chromosome, complete genomeregulatory protein1e-0757.8
NC_015676:208393:2117772117772215629786Methanosalsum zhilinae DSM 4017 chromosome, complete genomeATPase1e-0757.8
NC_006510:1731939:176115017611501762025876Geobacillus kaustophilus HTA426, complete genomedenitrification regulatory protein2e-0756.6
NC_020156:709241:724804724804725754951Nonlabens dokdonensis DSW-6, complete genomeATPase associated with various cellular activities AAA_53e-0756.2
NC_015957:2678544:2698102269810226993101209Streptomyces violaceusniger Tu 4113 chromosome, complete genomeATPase2e-0653.1
NC_020388:1479568:1508125150812515096691545Natronomonas moolapensis 8.8.11 complete genomehypothetical protein6e-0651.6