Pre_GI: BLASTP Hits

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Query: NC_007951:769500:792058 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 792058, End: 792858, Length: 801

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006351:73000:8007780077813241248Burkholderia pseudomallei K96243 chromosome 2, complete sequencetransposase4e-36151
NC_012987:32296:3462734627358321206Methylobacterium extorquens DM4 plasmid p1METDI, complete sequencetransposase of ISMdi25, IS30 family3e-29129
NC_010511:1641416:1661572166157216629721401Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit5e-29128
NC_010511:3106418:3107219310721931086191401Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit5e-29128
NC_010511:3199643:3216622321662232180221401Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit5e-29128
NC_010511:3674178:3734542373454237359421401Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit5e-29128
NC_010511:4450312:4460996446099644623961401Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit5e-29128
NC_010511:4450312:4468528446852844699281401Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit5e-29128
NC_010511:6067000:6134912613491261363121401Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit5e-29128
NC_010511:7400255:7406352740635274077521401Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit5e-29128
NC_010511:2775465:2792299279229927937441446Methylobacterium sp. 4-46 chromosome, complete genomeintegrase catalytic subunit8e-29127
NC_015594:410454:4381904381904393981209Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeIntegrase catalytic protein5e-28124
NC_015723:430165:4520574520574534541398Cupriavidus necator N-1 chromosome 2, complete sequenceintegrase4e-26118
NC_015458:2998000:3000056300005630014531398Pusillimonas sp. T7-7 chromosome, complete genomeintegrase catalytic region7e-25114
NC_009921:5331565:5332965533296553343651401Frankia sp. EAN1pec, complete genomeIntegrase catalytic region1e-24114
NC_013169:1845735:1854367185436718557641398Kytococcus sedentarius DSM 20547, complete genometransposase, IS30 family1e-23110
NC_008699:56500:7234172341737801440Nocardioides sp. JS614, complete genomeIntegrase, catalytic region7e-23107
NC_008699:590000:6012646012646027031440Nocardioides sp. JS614, complete genomeIntegrase, catalytic region7e-23107
NC_008146:4936262:4945024494502449464481425Mycobacterium sp. MCS, complete genomeIntegrase, catalytic region2e-22106
NC_012520:28324:4165841658430581401Rhodococcus opacus B4 plasmid pROB01, complete sequenceputative transposase for insertion sequence element3e-22105
NC_014215:2295500:2295634229563422970521419Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Integrase, catalytic region8e-22104
NC_016787:1350676:1367193136719313686321440Corynebacterium diphtheriae HC03 chromosome, complete genomeintegrase catalytic subunit3e-21102
NC_016787:1782951:1795338179533817967771440Corynebacterium diphtheriae HC03 chromosome, complete genomeintegrase catalytic subunit3e-21102
NC_016788:1785287:179799817979981798804807Corynebacterium diphtheriae HC04 chromosome, complete genomeintegrase catalytic subunit4e-21102
NC_016790:1758000:177037117703711771177807Corynebacterium diphtheriae VA01 chromosome, complete genometransposase-like protein4e-21102
NC_016782:1359000:1374116137411613755551440Corynebacterium diphtheriae 241 chromosome, complete genometransposase-like protein7e-21101
NC_016786:1359064:1374086137408613755251440Corynebacterium diphtheriae HC01 chromosome, complete genometransposase-like protein7e-21101
NC_016799:1343020:1427427142742714288661440Corynebacterium diphtheriae 31A chromosome, complete genomeintegrase catalytic subunit7e-21101
NC_018583:95388:1196881196881210011314Gordonia sp. KTR9 plasmid pGKT3, complete sequenceTransposase-like protein, IS30 family9e-21100
NC_016802:1815098:1830581183058118320201440Corynebacterium diphtheriae HC02 chromosome, complete genometransposase-like protein3e-2099
NC_008278:2732890:2748719274871927500321314Frankia alni ACN14a, complete genomePutative transposase6e-2098.2
NC_008543:61000:7178371783731801398Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceIntegrase, catalytic region2e-1995.9
NC_010515:1375091:1398275139827513996721398Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region2e-1995.9
NC_010515:1428664:1442471144247114438681398Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region2e-1995.9
NC_010515:1205258:1210702121070212120991398Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region2e-1995.9
NC_010515:1124298:1140307114030711417041398Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region2e-1995.9
NC_010508:981377:9919639919639933601398Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceIntegrase catalytic region2e-1995.9
NC_014169:1442435:1459522145952214607811260Bifidobacterium longum subsp. longum JDM301 chromosome, completeFis family transcriptional regulator4e-1582
NC_006087:1483761:1489552148955214907631212Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, ISlxx55e-1581.6
NC_006087:1425682:1425682142568214268931212Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, ISlxx55e-1581.6
NC_006087:28490:5711357113583241212Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, ISlxx55e-1581.6
NC_006087:765081:7811777811777823881212Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, ISlxx55e-1581.6
NC_013169:1545890:1550774155077415519311158Kytococcus sedentarius DSM 20547, complete genometransposase, IS30 family2e-1479.7
NC_013169:2351475:2375776237577623769331158Kytococcus sedentarius DSM 20547, complete genometransposase, IS30 family2e-1479.7
NC_011593:2288993:2304407230440723055941188Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,Fis family transcriptional regulator2e-1479.3
NC_017219:2292040:2304225230422523054961272Bifidobacterium longum subsp. infantis ATCC 15697, complete genometransposase3e-1479.3
NC_017219:1163000:1177702117770211789701269Bifidobacterium longum subsp. infantis ATCC 15697, complete genometransposase3e-1479.3
NC_011593:1163000:1177911117791111792121302Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,Fis family transcriptional regulator3e-1479.3
NC_015067:2282000:2282826228282622838301005Bifidobacterium longum subsp. longum JCM 1217, complete genometransposase3e-1479.3
NC_015052:1569255:1584261158426115855651305Bifidobacterium longum subsp. infantis 157F, complete genometransposase3e-1479
NC_015052:1569255:1575089157508915763601272Bifidobacterium longum subsp. infantis 157F, complete genometransposase3e-1479
NC_010816:621849:6388286388286400991272Bifidobacterium longum DJO10A, complete genomeIS30 family transposase3e-1479
NC_015067:459626:4596264596264608971272Bifidobacterium longum subsp. longum JCM 1217, complete genometransposase3e-1479
NC_015052:471944:4892344892344905051272Bifidobacterium longum subsp. infantis 157F, complete genometransposase3e-1479
NC_017904:2379387:239397423939742394588615Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein7e-1477.8
NC_016113:803268:8061678061678073841218Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencetransposase8e-1477.8
NC_013757:729986:7358407358407371051266Geodermatophilus obscurus DSM 43160, complete genomeIntegrase catalytic region8e-1477.8
NC_017955:3731480:3837263383726338383001038Modestobacter marinus, complete genometransposase4e-1375.5
NC_017955:4746441:4754866475486647560711206Modestobacter marinus, complete genometransposase4e-1272
NC_009142:4046376:406449740644974065438942Saccharopolyspora erythraea NRRL 2338, complete genometransposase, ISlxx57e-1271.2
NC_003450:179689:1928571928571944671611Corynebacterium glutamicum ATCC 13032, complete genometransposase4e-1168.6
NC_006958:179690:1929541929541944681515Corynebacterium glutamicum ATCC 13032, complete genomeTRANSPOSASE4e-1168.6
NC_006958:2214893:2236691223669122382051515Corynebacterium glutamicum ATCC 13032, complete genomeTransposase4e-1168.6
NC_015957:7348269:7364210736421073653671158Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit8e-1167.8
NC_014500:1862000:189475918947591895517759Dickeya dadantii 3937 chromosome, complete genomeISEch7 transposase8e-1167.8
NC_013739:717352:7351527351527363811230Conexibacter woesei DSM 14684, complete genomeIntegrase catalytic region1e-1067
NC_018524:301992:3102703102703112951026Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeintegrase core domain protein2e-1066.6
NC_014306:4106569:4112754411275441139141161Erwinia billingiae Eb661, complete genomeIntegrase catalytic region2e-1066.2
NC_020911:1859210:1861596186159618626751080Octadecabacter antarcticus 307, complete genomeIS30-family transposase3e-1065.9
NC_019673:189487:198811198811199788978Saccharothrix espanaensis DSM 44229 complete genomeIntegrase, catalytic subunit3e-1065.9
NC_020911:349610:3656783656783668381161Octadecabacter antarcticus 307, complete genomeIS30-family transposase3e-1065.9
NC_007492:3462929:3500300350030035013281029Pseudomonas fluorescens PfO-1, complete genomeIntegrase, catalytic region4e-1065.5
NC_014306:3102000:3122062312206231232221161Erwinia billingiae Eb661, complete genomeIntegrase4e-1065.5
NC_016590:1380092:1391693139169313928531161Burkholderia sp. YI23 chromosome 3, complete sequenceintegrase catalytic subunit3e-1065.5
NC_016626:1781956:1783141178314117843011161Burkholderia sp. YI23 plasmid byi_1p, complete sequenceintegrase catalytic subunit3e-1065.5
NC_015730:1799500:180164218016421802577936Roseobacter litoralis Och 149 chromosome, complete genomeputative transposase3e-1065.5
NC_019673:1039258:106244010624401063417978Saccharothrix espanaensis DSM 44229 complete genomeIntegrase, catalytic subunit5e-1065.1
NC_019673:6394319:640572764057276406704978Saccharothrix espanaensis DSM 44229 complete genomeIntegrase, catalytic subunit5e-1065.1
NC_015064:2341152:2341152234115223423121161Acidobacterium sp. MP5ACTX9 chromosome, complete genomeIntegrase catalytic region6e-1064.7
NC_017506:93494:1306491306491318181170Marinobacter adhaerens HP15 chromosome, complete genometransposase, IS30 family9e-1064.3
NC_015663:1869000:188791418879141888912999Enterobacter aerogenes KCTC 2190 chromosome, complete genomeintegrase catalytic subunit9e-1064.3
NC_014305:97055:1141321141321152921161Erwinia billingiae Eb661 plasmid pEB170, complete sequenceIntegrase core domain protein1e-0963.9
NC_007492:3180480:3190613319061331917731161Pseudomonas fluorescens PfO-1, complete genomeIntegrase, catalytic region2e-0963.5
NC_015222:2475792:2490939249093924920931155Nitrosomonas sp. AL212 chromosome, complete genomeintegrase catalytic region1e-0963.5
NC_008314:477722:5095315095315106431113Ralstonia eutropha H16 chromosome 2, complete sequenceTransposase IS301e-0963.5
NC_009255:1344000:1353375135337513544301056Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegrase catalytic subunit2e-0963.2
NC_009255:1250939:1280260128026012813151056Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegrase catalytic subunit2e-0963.2
NC_009255:1250939:1268969126896912700241056Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegrase catalytic subunit2e-0963.2
NC_009254:700891:7118587118587129131056Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit2e-0963.2
NC_009254:329700:3380183380183390731056Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit2e-0963.2
NC_009254:23000:3429934299353541056Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit2e-0963.2
NC_007948:4558000:4570883457088345720431161Polaromonas sp. JS666, complete genomeputative transcriptional regulator, Fis family2e-0963.2
NC_008148:2231045:2235911223591122370231113Rubrobacter xylanophilus DSM 9941, complete genomeIntegrase, catalytic region2e-0963.2
NC_009255:1890112:1903451190345119045061056Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegrase catalytic subunit2e-0963.2
NC_009255:763157:7823137823137833681056Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegrase catalytic subunit2e-0963.2
NC_007908:1252189:1275731127573112768911161Rhodoferax ferrireducens T118, complete genomeIntegrase2e-0963.2
NC_009256:2907998:2908350290835029094051056Burkholderia vietnamiensis G4 chromosome 1, complete sequenceintegrase catalytic subunit2e-0963.2
NC_009256:277020:2860022860022870571056Burkholderia vietnamiensis G4 chromosome 1, complete sequenceintegrase catalytic subunit2e-0963.2
NC_009256:277020:2822662822662833211056Burkholderia vietnamiensis G4 chromosome 1, complete sequenceintegrase catalytic subunit2e-0963.2
NC_009256:2725836:2738726273872627397811056Burkholderia vietnamiensis G4 chromosome 1, complete sequenceintegrase catalytic subunit2e-0963.2
NC_009256:2193647:2209918220991822109731056Burkholderia vietnamiensis G4 chromosome 1, complete sequenceintegrase catalytic subunit2e-0963.2
NC_009256:1365500:1371308137130813723631056Burkholderia vietnamiensis G4 chromosome 1, complete sequenceintegrase catalytic subunit2e-0963.2
NC_009256:1282793:1285438128543812864931056Burkholderia vietnamiensis G4 chromosome 1, complete sequenceintegrase catalytic subunit2e-0963.2
NC_009138:3153576:3176922317692231780821161Herminiimonas arsenicoxydans, complete genometransposase2e-0962.8
NC_009659:3384997:3412023341202334131351113Janthinobacterium sp. Marseille chromosome, complete genomeIS30 family transposase2e-0962.8
NC_016616:2644883:2652924265292426540841161Dechlorosoma suillum PS chromosome, complete genometransposase, IS30 family2e-0962.8
NC_010552:335989:3419503419503431101161Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceIntegrase catalytic region2e-0962.8
NC_009138:3153576:3170285317028531714451161Herminiimonas arsenicoxydans, complete genometransposase3e-0962.4
NC_009659:3384997:3405386340538634064981113Janthinobacterium sp. Marseille chromosome, complete genomeIS30 family transposase3e-0962.4
NC_010524:3302398:331796133179613318941981Leptothrix cholodnii SP-6, complete genomeIntegrase catalytic region4e-0962
NC_010524:3302398:331412433141243315104981Leptothrix cholodnii SP-6, complete genomeIntegrase catalytic region4e-0962
NC_010524:933191:945558945558946538981Leptothrix cholodnii SP-6, complete genomeIntegrase catalytic region4e-0962
NC_008782:1308007:1315520131552013166801161Acidovorax sp. JS42, complete genomeIntegrase, catalytic region4e-0962
NC_014228:4360676:437893843789384379672735Xenorhabdus nematophila ATCC 19061, complete genometransposase (fragment)6e-0961.6
NC_010617:263985:2801982801982813821185Kocuria rhizophila DC2201, complete genomeputative transposase7e-0961.2
NC_015312:61752:7069570695718791185Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeIntegrase catalytic region1e-0860.8
NC_015312:6398931:6405987640598764071711185Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeIntegrase catalytic region1e-0860.8
NC_019673:1384795:1398682139868213996861005Saccharothrix espanaensis DSM 44229 complete genomeTransposase, IS1086 family1e-0860.5
NC_019673:2733327:2744796274479627458001005Saccharothrix espanaensis DSM 44229 complete genome1e-0860.1
NC_010002:1879220:1948429194842919495891161Delftia acidovorans SPH-1, complete genomeIntegrase catalytic region1e-0860.1
NC_020133:5485528:549121754912175491747531Mycobacterium liflandii 128FXT, complete genome4e-0858.5
NC_017955:2327500:233835723383572339145789Modestobacter marinus, complete genometransposase, IS30 family7e-0857.8
NC_004547:1837500:185844618584461858988543Erwinia carotovora subsp. atroseptica SCRI1043, complete genometransposase (partial)8e-0857.8
NC_008573:195317:2267032267032277311029Shewanella sp. ANA-3 plasmid 1, complete sequenceIntegrase, catalytic region1e-0757
NC_009142:5519208:553463955346395534869231Saccharopolyspora erythraea NRRL 2338, complete genometransposase1e-0757
NC_014151:813755:8244208244208254361017Cellulomonas flavigena DSM 20109 chromosome, complete genomeIntegrase catalytic region2e-0756.6
NC_014151:449732:4677734677734687891017Cellulomonas flavigena DSM 20109 chromosome, complete genomeIntegrase catalytic region2e-0756.6
NC_014151:3797861:3805051380505138060671017Cellulomonas flavigena DSM 20109 chromosome, complete genomeIntegrase catalytic region2e-0756.6
NC_016626:1592781:160345716034571604335879Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative transposase2e-0756.6
NC_020908:823589:8242518242518252731023Octadecabacter arcticus 238, complete genomeIS30 family transposase2e-0756.2
NC_020908:301563:3189353189353199571023Octadecabacter arcticus 238, complete genomeIS30 family transposase3e-0755.8
NC_009434:281474:2938392938392948671029Pseudomonas stutzeri A1501, complete genomeputative transposase3e-0755.8
NC_009434:3611738:3692464369246436934921029Pseudomonas stutzeri A1501, complete genometransposase3e-0755.8
NC_020908:1889759:1905087190508719061091023Octadecabacter arcticus 238, complete genomeIS30 family transposase3e-0755.8
NC_020908:823589:8375908375908386121023Octadecabacter arcticus 238, complete genomeIS30 family transposase3e-0755.8
NC_016906:181254:2335172335172345481032Gordonia polyisoprenivorans VH2 chromosome, complete genomeintegrase core domain-containing protein4e-0755.5
NC_016906:3286384:3297924329792432989551032Gordonia polyisoprenivorans VH2 chromosome, complete genomeintegrase catalytic subunit4e-0755.5
NC_020908:2571943:2586800258680025878221023Octadecabacter arcticus 238, complete genomeIS30 family transposase4e-0755.5
NC_013422:991500:1004956100495610059841029Halothiobacillus neapolitanus c2, complete genomeIntegrase catalytic region4e-0755.5
NC_007974:2323436:2328739232873923297671029Ralstonia metallidurans CH34 chromosome 2, complete sequenceIntegrase, catalytic region5e-0755.1
NC_008148:2498000:2538393253839325394701078Rubrobacter xylanophilus DSM 9941, complete genome5e-0755.1
NC_008789:1393526:139877613987761399327552Halorhodospira halophila SL1, complete genomeISXoo15 transposase6e-0755.1
NC_020908:301563:303585303585304289705Octadecabacter arcticus 238, complete genome6e-0754.7
NC_007952:3283394:3307756330775633087781023Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative transposase6e-0651.6