Pre_GI: BLASTP Hits

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Query: NC_007951:1928906:1933494 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1933494, End: 1934138, Length: 645

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010084:534937:538121538121538765645Burkholderia multivorans ATCC 17616 chromosome 1, completemaleylacetoacetate isomerase2e-74278
NC_007508:4283750:431293743129374313599663Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeMaleylacetoacetate isomerase3e-54211
NC_003919:4258788:428001342800134280675663Xanthomonas axonopodis pv. citri str. 306, complete genomemaleylacetoacetate isomerase2e-53209
NC_009379:1910891:192810419281041928796693Polynucleobacter sp. QLW-P1DMWA-1, complete genomemaleylacetoacetate isomerase2e-53208
NC_008786:4216152:421896342189634219631669Verminephrobacter eiseniae EF01-2, complete genomemaleylacetoacetate isomerase9e-51199
NC_010717:4626178:464860546486054649267663Xanthomonas oryzae pv. oryzae PXO99A, complete genomemaleylacetoacetate isomerase9e-51199
NC_009524:861500:880815880815881462648Psychrobacter sp. PRwf-1 chromosome, complete genomemaleylacetoacetate isomerase2e-47188
NC_010688:4235528:426271942627194263381663Xanthomonas campestris pv. campestris, complete genomemaleylacetoacetate isomerase1e-46186
NC_009524:861500:876371876371877015645Psychrobacter sp. PRwf-1 chromosome, complete genomemaleylacetoacetate isomerase3e-44177
NC_013446:3147202:317804531780453178689645Comamonas testosteroni CNB-2, complete genomemaleylacetoacetate isomerase7e-44176
NC_008781:2575213:259538625953862596024639Polaromonas naphthalenivorans CJ2, complete genomemaleylacetoacetate isomerase3e-40164
NC_016026:296951:296307296307296954648Micavibrio aeruginosavorus ARL-13 chromosome, complete genomemaleylacetoacetate isomerase1e-37155
NC_007951:2045830:204583020458302046480651Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative maleylpyruvate isomerase (MhbI)9e-37153
NC_010501:908000:911510911510912142633Pseudomonas putida W619, complete genomemaleylacetoacetate isomerase4e-34144
NC_020209:397376:402317402317402952636Pseudomonas poae RE*1-1-14, complete genomemaleylacetoacetate isomerase7e-33140
NC_015726:1813961:181948918194891820094606Cupriavidus necator N-1 chromosome 1, complete sequencemaleylacetoacetate isomerase MaiA1e-26119
NC_007516:532500:535525535525536205681Synechococcus sp. CC9605, complete genomeputative maleylacetoacetate isomerase4e-21101
NC_010162:7571525:759098575909857591608624Sorangium cellulosum 'So ce 56', complete genomehypothetical protein6e-0960.8
NC_009656:3733913:374744537474453748047603Pseudomonas aeruginosa PA7 chromosome, complete genomeputative glutathione S-transferase7e-0857.4
NC_011365:1865687:189016918901691890768600Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeglutathione S-transferase domain-containing protein8e-0857.4
NC_012583:440420:458930458930459547618Vibrio cholerae O395 chromosome chromosome II, complete sequenceglutathione S-transferase, putative2e-0756.2
NC_002506:370629:430170430170430850681Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeglutathione S-transferase, putative2e-0755.8
NC_009456:787322:804395804395805075681Vibrio cholerae O395 chromosome 1, complete sequenceputative glutathione S-transferase2e-0755.8
NC_012667:931390:936303936303936983681Vibrio cholerae MJ-1236 chromosome 2, complete genomemaleylacetoacetate isomerase/glutathione S-transferase2e-0755.8
NC_016446:119914:130717130717131391675Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completemaleylacetoacetate isomerase/glutathione S-transferase2e-0755.8
NC_016945:370471:429995429995430669675Vibrio cholerae IEC224 chromosome II, complete sequenceglutathione S-transferase2e-0755.8
NC_014623:723089:731093731093731701609Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeglutathione s-transferase4e-0754.7
NC_015856:2488297:249016224901622490794633Collimonas fungivorans Ter331 chromosome, complete genomeglutathione S-transferase2e-0652.4