Pre_GI: BLASTP Hits

Some Help

Query: NC_007951:1711223:1726082 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1726082, End: 1727257, Length: 1176

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008313:1956500:1957749195774919591191371Ralstonia eutropha H16 chromosome 1, complete sequenceepoxide hydrolase3e-126452
NC_008543:323773:3407433407433420201278Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceEpoxide hydrolase domain protein2e-118425
NC_007492:6372900:6389822638982263911381317Pseudomonas fluorescens PfO-1, complete genomeEpoxide hydrolase-like4e-118424
NC_011001:568970:5853495853495866261278Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative hydrolase6e-118424
NC_015675:4526500:4552548455254845538401293Mesorhizobium opportunistum WSM2075 chromosome, complete genomeEpoxide hydrolase domain-containing protein8e-112404
NC_015675:4526500:4529980452998045312781299Mesorhizobium opportunistum WSM2075 chromosome, complete genomeEpoxide hydrolase domain-containing protein4e-108391
NC_009077:2308634:2325926232592623270681143Mycobacterium sp. JLS, complete genomeEpoxide hydrolase domain protein5e-104378
NC_008726:549102:5619515619515630931143Mycobacterium vanbaalenii PYR-1, complete genomeEpoxide hydrolase domain protein5e-104378
NC_009077:1725683:1737095173709517382371143Mycobacterium sp. JLS, complete genomeEpoxide hydrolase domain protein5e-104378
NC_008705:1790222:1801634180163418027761143Mycobacterium sp. KMS, complete genomeEpoxide hydrolase domain protein5e-104378
NC_014814:169374:1801211801211812631143Mycobacterium sp. Spyr1 chromosome, complete genomehydrolase or acyltransferase of alpha/beta superfamily6e-104377
NC_009338:630130:6656626656626667951134Mycobacterium gilvum PYR-GCK chromosome, complete genomeepocide hydrolase domain-containing protein7e-104377
NC_009338:555587:5895775895775907101134Mycobacterium gilvum PYR-GCK chromosome, complete genomeepocide hydrolase domain-containing protein7e-104377
NC_008146:1748026:1798610179861017997431134Mycobacterium sp. MCS, complete genomeEpoxide hydrolase-like protein7e-104377
NC_016604:3184855:3185396318539631865381143Mycobacterium rhodesiae NBB3 chromosome, complete genomealpha/beta hydrolase2e-101369
NC_016113:11500:1551715517166351119Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceEpoxide hydrolase domain-containing protein2e-97355
NC_009380:3043140:3053122305312230542791158Salinispora tropica CNB-440 chromosome, complete genomeepocide hydrolase domain-containing protein4e-90332
NC_015434:5434500:5445350544535054465101161Verrucosispora maris AB-18-032 chromosome, complete genomeputative epoxide hydrolase7e-90331
NC_015690:1348691:1365074136507413662401167Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative hydrolase or acyltransferase of alpha/beta superfamily5e-82305
NC_016935:1868839:1888759188875918899251167Paenibacillus mucilaginosus 3016 chromosome, complete genomealpha/beta hydrolase1e-81303
NC_014659:2737843:2754030275403027552561227Rhodococcus equi 103S, complete genomeepoxide hydrolase4e-81301
NC_013406:3926531:3933507393350739346671161Paenibacillus sp. Y412MC10 chromosome, complete genomeEpoxide hydrolase domain-containing protein7e-77287
NC_008268:7576365:7583065758306575842371173Rhodococcus sp. RHA1, complete genomepossible epoxide hydrolase2e-76286
NC_013729:4978401:4987161498716149883001140Kribbella flavida DSM 17836, complete genomeEpoxide hydrolase domain protein4e-73275
NC_008278:613329:6142406142406153281089Frankia alni ACN14a, complete genomeEpoxide hydrolase5e-72271
NC_013947:5075581:5080684508068450818111128Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeEpoxide hydrolase domain-containing protein9e-72271
NC_015125:788931:794851794851795801951Microbacterium testaceum StLB037, complete genomepredicted hydrolase or acyltransferase3e-68259
NC_018524:444217:4459284459284471061179Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeepoxide hydrolase family protein2e-66253
NC_014815:2055286:2074948207494820760661119Micromonospora sp. L5 chromosome, complete genomemicrosomal epoxide hydrolase2e-61236
NC_014834:959986:9724489724489735691122Rhodopseudomonas palustris DX-1 chromosome, complete genomeepoxide hydrolase domain-containing protein4e-58225
NC_009953:4942500:4946974494697449481161143Salinispora arenicola CNS-205 chromosome, complete genomeepocide hydrolase domain-containing protein1e-57224
NC_008278:2813362:2840115284011528413501236Frankia alni ACN14a, complete genomePutative epoxide hydrolase3e-55215
NC_015500:1236874:1244664124466412457521089Treponema brennaborense DSM 12168 chromosome, complete genomeMicrosomal epoxide hydrolase1e-54213
NC_011961:891815:9056279056279067421116Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceepoxide hydrolase 1 (Microsomal epoxide hydrolase)(Epoxide hydratase)2e-51203