Pre_GI: BLASTP Hits

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Query: NC_007948:4646344:4675106 Polaromonas sp. JS666, complete genome

Start: 4675106, End: 4677736, Length: 2631

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012968:507988:5105355105355131772643Methylotenera mobilis JLW8, complete genomeIntegrase catalytic region2e-82307
NC_020050:1:1313613136155262391Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01, partialTnsA endonuclease family protein,integrase family protein4e-82306
NC_016616:2112211:2131716213171621343702655Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase5e-79296
NC_011884:2397248:2404335240433524070882754Cyanothece sp. PCC 7425, complete genomeIntegrase catalytic region5e-74279
NC_016616:2997348:3024838302483830274982661Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase5e-72273
NC_009255:1105786:1160917116091711636252709Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegrase catalytic subunit5e-63243
NC_010086:1816378:1860062186006218627702709Burkholderia multivorans ATCC 17616 chromosome 2, completeIntegrase catalytic region5e-63243
NC_012857:41946:4990849908526102703Ralstonia pickettii 12D chromosome 2, complete genomeIntegrase catalytic region6e-61236
NC_010678:900389:9083519083519110532703Ralstonia pickettii 12J chromosome 2, complete sequenceIntegrase catalytic region6e-61236
NC_017075:1837966:1851199185119918539372739Rubrivivax gelatinosus IL144, complete genomeintegrase catalytic subunit2e-49197
NC_009256:176403:1834711834711864102940Burkholderia vietnamiensis G4 chromosome 1, complete sequenceintegrase catalytic subunit1e-39165
NC_012721:1986436:1998174199817419994301257Burkholderia glumae BGR1 chromosome 2, complete genome5e-37157
NC_008060:3155133:3187324318732431902542931Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceIntegrase, catalytic region3e-36154
NC_008542:197500:2364472364472394793033Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceIntegrase, catalytic region4e-36154
NC_010571:637398:6493176493176521602844Opitutus terrae PB90-1, complete genomeIntegrase catalytic region5e-31137
NC_011071:4000620:4015645401564540180292385Stenotrophomonas maltophilia R551-3, complete genomeIntegrase catalytic region4e-29130
NC_010681:4299979:4326918432691843298002883Burkholderia phytofirmans PsJN chromosome 1, complete sequenceIntegrase catalytic region3e-26120
NC_007575:1663088:1667067166706716689231857Sulfurimonas denitrificans DSM 1251, complete genomeintegrase catalytic subunit3e-21104
NC_010410:3606826:3693499369349936954091911Acinetobacter baumannii AYE, complete genomeputative transposase6e-1997.1
NC_017387:247462:2474622474622493721911Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometransposition protein B5e-1997.1
NC_017162:270460:2739922739922759021911Acinetobacter baumannii 1656-2 chromosome, complete genometransposase1e-1896.3
NC_015572:1:1358813588155761989Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit7e-1893.2
NC_016616:915755:9399229399229418231902Dechlorosoma suillum PS chromosome, complete genomeintegrase family protein2e-1792
NC_012440:1215838:1236077123607712379361860Persephonella marina EX-H1, complete genomeTniA transposase2e-1792
NC_010939:405477:4235454235454254731929Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative transposase5e-1790.5
NC_010120:1065833:1074745107474510762891545Neisseria meningitidis 053442, complete genomeconserved hypothetical protein6e-1790.1
NC_012856:207194:2113422113422132341893Ralstonia pickettii 12D chromosome 1, complete genomeIntegrase catalytic region1e-1689.4
NC_009656:3127240:3138806313880631406501845Pseudomonas aeruginosa PA7 chromosome, complete genomeintegrase catalytic subunit1e-1689
NC_009659:3384997:3399629339962934014611833Janthinobacterium sp. Marseille chromosome, complete genometransposase3e-1687.8
NC_020409:2222000:2225628222562822275471920Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeIntegrase catalytic region1e-1586.3
NC_008061:2153495:2168333216833321701321800Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceIntegrase, catalytic region2e-1585.1
NC_008543:90312:99641996411014401800Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceIntegrase, catalytic region2e-1585.1
NC_013166:32474:3602436024378921869Kangiella koreensis DSM 16069, complete genomeTransposase-like Mu3e-1584.7
NC_012856:2633890:2649928264992826518261899Ralstonia pickettii 12D chromosome 1, complete genomeTniA transposase8e-1583.2
NC_014539:1:1839118391203521962Burkholderia sp. CCGE1003 chromosome 1, complete sequenceintegrase catalytic subunit2e-1482
NC_008782:1277117:1296668129666812983381671Acidovorax sp. JS42, complete genomeIntegrase, catalytic region2e-1481.6
NC_014752:1063506:1072340107234010735271188Neisseria lactamica ST-640, complete genomeintegrase4e-1480.9
NC_007498:134442:1538771538771557541878Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein1e-1379.7
NC_009348:1064664:1073012107301210748921881Aeromonas salmonicida subsp. salmonicida A449, complete genomeTniA transposase2e-1378.6
NC_011761:2217632:2229241222924122311211881Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completetransposon transposition protein B2e-1378.2
NC_010682:1652636:1669589166958916715111923Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein7e-1376.6
NC_002678:5060670:5088718508871850903251608Mesorhizobium loti MAFF303099, complete genometransposase8e-1376.6
NC_007912:231817:2359352359352377701836Saccharophagus degradans 2-40, complete genomeUrease, beta subunit9e-1376.3
NC_003384:157158:1693331693331706191287Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid1e-1275.9
NC_009349:78000:8685886858885731716Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTniA protein1e-1275.9
NC_013365:92973:1039281039281051961269Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeTniA protein2e-1275.5
NC_016860:4055117:4082776408277640844551680Salmonella enterica subsp. enterica serovar Typhimurium strputative transposase TniA2e-1275.5
NC_009254:637952:6919556919556935831629Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit1e-1275.5
NC_016616:2644883:2650240265024026519221683Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase3e-1274.7
NC_010682:3033646:3051516305151630534381923Ralstonia pickettii 12J chromosome 1, complete sequenceTniA transposase7e-1273.6
NC_010682:1763769:1768716176871617706381923Ralstonia pickettii 12J chromosome 1, complete sequenceTniA transposase7e-1273.6
NC_012855:39751:6146561465634772013Ralstonia pickettii 12D plasmid pRp12D01, complete sequenceIntegrase catalytic region8e-1273.2
NC_017986:1885613:1888422188842218901011680Pseudomonas putida ND6 chromosome, complete genomeTniA1e-1172.8
NC_012968:63898:7520175201771921992Methylotenera mobilis JLW8, complete genomeIntegrase catalytic region2e-1171.6
NC_007517:3430237:3435106343510634370161911Geobacter metallireducens GS-15, complete genometransposase3e-1171.2
NC_014550:3377834:3423654342365434251621509Arthrobacter arilaitensis Re117, complete genome4e-1170.9
NC_009956:88354:9555895558970511494Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequenceintegrase catalytic region1e-1069.3
NC_017986:5833819:5844511584451158462291719Pseudomonas putida ND6 chromosome, complete genomeintegrase catalytic subunit2e-1068.6
NC_015572:1:4276342763446431881Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit3e-1068.2
NC_007626:4135961:4135961413596141379221962Magnetospirillum magneticum AMB-1, complete genometransposase4e-1067.8
NC_019673:6394319:6402870640287064042431374Saccharothrix espanaensis DSM 44229 complete genomeputative integrase4e-1067.4
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete5e-1067.4
NC_013235:3913000:3930560393056039322241665Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region9e-1066.2
NC_007508:237771:2505222505222529242403Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transposase6e-0963.9
NC_014215:2259290:2281505228150522832051701Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,TniA protein6e-0963.5
NC_011777:161505:1772771772771787221446Bacillus cereus AH820 plasmid pAH820_272, complete sequenceputative transposase2e-0862
NC_015671:3093596:3101288310128831027181431Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase-like Mu7e-0860.1
NC_013893:1723939:1725148172514817265901443Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeTn552 transposase7e-0860.1
NC_014366:3555425:3567950356795035698481899Gamma proteobacterium HdN1, complete genomeIntegrase, catalytic region3e-0758.2
NC_008061:190287:2051762051762071641989Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceIntegrase, catalytic region7e-0757
NC_010515:2111691:2128434212843421301611728Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region8e-0756.6
NC_007520:407627:4259384259384278481911Thiomicrospira crunogena XCL-2, complete genomeIntegrase, catalytic region5e-0654.3