Pre_GI: BLASTP Hits

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Query: NC_007948:4558000:4579510 Polaromonas sp. JS666, complete genome

Start: 4579510, End: 4579806, Length: 297

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014910:1912552:193278219327821933078297Alicycliphilus denitrificans BC chromosome, complete genomesarcosine oxidase alpha subunit2e-29127
NC_010676:2793237:282227828222782822670393Burkholderia phytofirmans PsJN chromosome 2, complete sequencehypothetical protein1e-25114
NC_011144:2674242:269414026941402694721582Phenylobacterium zucineum HLK1, complete genomesarcosine oxidase alpha subunit9e-2199
NC_007948:4646344:466141346614134661769357Polaromonas sp. JS666, complete genomehypothetical protein1e-1788.6
NC_011883:2031222:203122220312222031530309Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,hypothetical protein1e-1478.6
NC_007948:4620661:464295346429534643252300Polaromonas sp. JS666, complete genomeputative sarcosine oxidase alpha subunit1e-1478.2
NC_015724:339500:353765353765354076312Cupriavidus necator N-1 plasmid BB2p, complete sequencesarcosine oxidase alpha subunit3e-1477.4
NC_007948:4646344:467081346708134671124312Polaromonas sp. JS666, complete genomeputative sarcosine oxidase alpha subunit3e-1477.4
NC_003065:27163:630916309163384294Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencehypothetical protein1e-1374.7
NC_003308:1:296882968829981294Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencehypothetical protein1e-1374.7
NC_015136:2282488:232551223255122325883372Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein8e-1268.9
NC_014815:4621552:464977246497724650026255Micromonospora sp. L5 chromosome, complete genomehypothetical protein3e-1063.9
NC_013926:71186:8670186701881371437Aciduliprofundum boonei T469 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase5e-1063.2
NC_009718:643200:6604156604156625822168Fervidobacterium nodosum Rt17-B1, complete genome1e-0962
NC_021184:2936244:294769929476992948022324Desulfotomaculum gibsoniae DSM 7213, complete genomehypothetical protein1e-0961.6
NC_013947:4363250:437861743786174378874258Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeferredoxin1e-0961.6
NC_012792:310443:3104433104433133972955Variovorax paradoxus S110 chromosome 2, complete genomeFAD dependent oxidoreductase2e-0961.2
NC_015737:2691246:269282226928222693139318Clostridium sp. SY8519, complete genomeNAD-dependent dehydrogenase3e-0960.8
NC_015172:1075592:110772111077211108041321Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehypothetical protein4e-0960.1
NC_000868:318434:3190643190643205091446Pyrococcus abyssi GE5, complete genomesarcosine oxidase, subunit alpha4e-0960.1
NC_000961:1532245:1532245153224515336931449Pyrococcus horikoshii OT3, complete genomeD-nopaline dehydrogenase6e-0959.7
NC_013522:991649:101603210160321016343312Thermanaerovibrio acidaminovorans DSM 6589, complete genomesarcosine oxidase, alpha subunit2e-0858.2
NC_015474:301428:3014283014283028641437Pyrococcus sp. NA2 chromosome, complete genomesarcosine oxidase, subunit alpha3e-0857
NC_020291:5409587:542230254223025422613312Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative anaerobic dehydrogenase1e-0755.1
NC_003413:1666520:1667150166715016685741425Pyrococcus furiosus DSM 3638, complete genomesarcosine oxidase subunit alpha2e-0754.3
NC_008391:2404443:241860424186042418948345Burkholderia cepacia AMMD chromosome 2, complete sequencehypothetical protein6e-0752.8
NC_014364:3001597:302762630276263027937312Spirochaeta smaragdinae DSM 11293 chromosome, complete genomehypothetical protein9e-0752.4
NC_007492:3954345:399635239963523996678327Pseudomonas fluorescens PfO-1, complete genomeFerredoxin2e-0651.2
NC_008027:5842740:584682658468265847140315Pseudomonas entomophila L48, complete genomehydrogen cyanide synthase HcnA3e-0650.8