Pre_GI: BLASTP Hits

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Query: NC_007925:3933765:3949342 Rhodopseudomonas palustris BisB18, complete genome

Start: 3949342, End: 3949620, Length: 279

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007626:697926:712256712256712492237Magnetospirillum magneticum AMB-1, complete genomePredicted transcriptional regulator1e-1685.1
NC_008687:965152:972058972058972303246Paracoccus denitrificans PD1222 chromosome 2, complete sequencehelix-turn-helix domain protein1e-1581.6
NC_014034:1330843:134702813470281347285258Rhodobacter capsulatus SB1003 chromosome, complete genomeXRE family transcriptional regulator3e-1373.9
NC_004547:1062410:107419910741991074447249Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative regulatory protein9e-1372.4
NC_005773:5310339:531147853114785311723246Pseudomonas syringae pv. phaseolicola 1448A, complete genomeDNA-binding protein1e-1272
NC_012962:4942000:494348549434854944096612Photorhabdus asymbiotica, complete genomehypothetical protein3e-1270.5
NC_002678:763808:780697780697780948252Mesorhizobium loti MAFF303099, complete genomehypothetical protein8e-1269.3
NC_004463:1717890:174528617452861745522237Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein7e-1269.3
NC_017249:8510121:854866085486608548896237Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein7e-1269.3
NC_020063:1051310:105768110576811057920240Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcription factor, MBF1 like protein8e-1268.9
NC_014500:3097362:314029631402963140550255Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein9e-1268.9
NC_004547:1062410:107453210745321074786255Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative regulatory protein9e-1268.9
NC_003911:1265972:127514412751441275398255Silicibacter pomeroyi DSS-3, complete genomeDNA-binding protein, putative1e-1168.9
NC_009428:807577:825669825669825926258Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeXRE family transcriptional regulator2e-1167.8
NC_012962:4942000:494316649431664943414249Photorhabdus asymbiotica, complete genomehypothetical protein2e-1167.8
NC_014500:3097362:314063831406383140886249Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein3e-1167
NC_009952:2217877:223175222317522232006255Dinoroseobacter shibae DFL 12, complete genomehypothetical protein5e-1166.6
NC_005126:3204980:320953832095383209798261Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein5e-1166.6
NC_014217:4550544:455986045598604560108249Starkeya novella DSM 506 chromosome, complete genomehelix-turn-helix domain protein6e-1166.2
NC_016845:4498097:451513345151334515378246Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Xre family transcriptional regulator6e-1062.8
NC_007651:3064530:313900931390093139266258Burkholderia thailandensis E264 chromosome I, complete sequenceDNA-binding protein3e-0960.5
NC_013131:8480384:850444485044448504677234Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, XRE family1e-0858.9
NC_009076:3564500:360646236064623606719258Burkholderia pseudomallei 1106a chromosome I, complete sequencetranscriptional regulator, XRE family1e-0858.5
NC_020541:1786500:179882317988231799110288Rhodanobacter sp. 2APBS1, complete genomeputative transcriptional regulator1e-0755.5
NC_007951:2233676:224693922469392247205267Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional Regulator, XRE family7e-0752.8
NC_017271:4852351:485831148583114858556246Xanthomonas campestris pv. raphani 756C chromosome, completeDNA-binding protein2e-0651.6
NC_007951:570500:579985579985580206222Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, XRE family2e-0651.2