Pre_GI: BLASTP Hits

Some Help

Query: NC_007604:1183497:1193397 Synechococcus elongatus PCC 7942, complete genome

Start: 1193397, End: 1194299, Length: 903

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:414696:426506426506427408903Synechococcus elongatus PCC 6301, complete genomehypothetical protein4e-152537
NC_018750:3741581:3762545376254537638551311Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein3e-39162
NC_011283:3177350:318059131805913181496906Klebsiella pneumoniae 342 chromosome, complete genome3-beta hydroxysteroid dehydrogenase/isomerase family protein6e-28124
NC_015677:3179910:320643532064353207325891Ramlibacter tataouinensis TTB310 chromosome, complete genomeUDP-galactose 4-epimerase1e-27124
NC_011365:1103927:111506511150651116036972Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-27121
NC_009617:3360990:336099033609903361880891Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-25116
NC_015953:46732:680036800368914912Streptomyces sp. SirexAA-E chromosome, complete genomeNAD-dependent epimerase/dehydratase6e-25114
NC_020260:1293860:131424913142491315145897Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-23110
NC_009778:1222273:123762012376201238516897Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-23109
NC_013282:1842412:185617118561711857067897Cronobacter turicensis, complete genomeUncharacterized protein C2A9.023e-23109
NC_013956:1994970:201379820137982014685888Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein1e-22107
NC_016816:2508204:250820425082042509091888Pantoea ananatis LMG 5342, complete genomeNAD-dependent epimerase/dehydratase3e-22105
NC_015566:3417951:343259734325973433562966Serratia sp. AS12 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-21103
NC_016609:606000:610154610154611044891Niastella koreensis GR20-10 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-21103
NC_016906:2871272:289620928962092897132924Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative NAD dependent epimerase/dehydratase1e-20100
NC_011283:2836000:287052228705222871415894Klebsiella pneumoniae 342 chromosome, complete genome3-beta hydroxysteroid dehydrogenase/isomerase family protein2e-1996.3
NC_010625:670482:695996695996696883888Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceNAD-dependent epimerase/dehydratase2e-1893.6
NC_015137:2616222:265972426597242660608885Burkholderia sp. CCGE1001 chromosome 2, complete sequenceNAD-dependent epimerase/dehydratase5e-1788.6
NC_015434:5434500:544681054468105447703894Verrucosispora maris AB-18-032 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-1480.5
NC_017186:7480714:749555374955537496488936Amycolatopsis mediterranei S699 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-1377
NC_014318:7480669:749550874955087496443936Amycolatopsis mediterranei U32 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-1377
NC_009921:4186000:419259941925994193534936Frankia sp. EAN1pec, complete genomeNAD-dependent epimerase/dehydratase4e-1375.9
NC_014012:1676983:170480617048061705723918Shewanella violacea DSS12, complete genomeUDP-glucose 4-epimerase, putative3e-0859.3
NC_016641:438500:454070454070455050981Paenibacillus terrae HPL-003 chromosome, complete genome3-beta hydroxysteroid dehydrogenase/isomerase4e-0858.9
NC_012969:142000:146031146031147002972Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeNAD-dependent epimerase/dehydratase7e-0858.2
NC_020829:5174354:521132952113295211955627Pseudomonas denitrificans ATCC 13867, complete genomeNAD-dependent epimerase/dehydratase1e-0757.4
NC_015572:1252000:129818912981891299151963Methylomonas methanica MC09 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-0756.6
NC_009439:2038303:206568020656802066642963Pseudomonas mendocina ymp, complete genomeNAD-dependent epimerase/dehydratase3e-0756.2
NC_014733:107394:1137211137211147431023Methylovorus sp. MP688 chromosome, complete genomenad-dependent epimerase/dehydratase4e-0755.5
NC_016112:57641:763407634077284945Methylomicrobium alcaliphilum chromosome, complete genomeUDP-glucose 4-epimerase5e-0755.5
NC_011060:514874:554032554032555000969Pelodictyon phaeoclathratiforme BU-1, complete genomeNAD-dependent epimerase/dehydratase6e-0755.1
NC_014931:5088125:510010351001035101062960Variovorax paradoxus EPS chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-0654.3
NC_015379:1887275:191240419124041913369966Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,NAD-dependent epimerase/dehydratase1e-0654.3
NC_008027:1559083:158039715803971581362966Pseudomonas entomophila L48, complete genomeUDP-glucose 4-epimerase1e-0653.9
NC_012968:1108687:112730611273061128262957Methylotenera mobilis JLW8, complete genomeNAD-dependent epimerase/dehydratase1e-0653.9
NC_002505:238569:267392267392268363972Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeUDP-glucose 4-epimerase1e-0653.9
NC_009457:2764972:279252627925262793497972Vibrio cholerae O395 chromosome 2, complete sequenceUDP-glucose 4-epimerase1e-0653.9
NC_012578:224559:252119252119253090972Vibrio cholerae M66-2 chromosome I, complete sequenceUDP-glucose 4-epimerase1e-0653.9
NC_012582:272320:299874299874300845972Vibrio cholerae O395 chromosome chromosome I, complete sequenceUDP-glucose 4-epimerase1e-0653.9
NC_012668:368305:371877371877372848972Vibrio cholerae MJ-1236 chromosome 1, complete sequenceUDP-glucose 4-epimerase1e-0653.9
NC_016445:2663837:269139926913992692370972Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeUDP-glucose 4-epimerase1e-0653.9
NC_016944:238580:267403267403268374972Vibrio cholerae IEC224 chromosome I, complete sequenceUDP-glucose 4-epimerase1e-0653.9
NC_004129:4993974:500475350047535005715963Pseudomonas fluorescens Pf-5, complete genomeUDP-glucose 4-epimerase, putative4e-0652.4
NC_014958:3131191:3136065313606531376271563Deinococcus maricopensis DSM 21211 chromosome, complete genomesugar transferase6e-0652