Pre_GI: BLASTP Hits

Some Help

Query: NC_007492:4310828:4313480 Pseudomonas fluorescens PfO-1, complete genome

Start: 4313480, End: 4313854, Length: 375

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010682:1913941:192766019276601928046387Ralstonia pickettii 12J chromosome 1, complete sequencecopper resistance protein CopC1e-33141
NC_009659:892272:897603897603897989387Janthinobacterium sp. Marseille chromosome, complete genomecopper resistance signal peptide protein C4e-32136
NC_011748:3958572:397205939720593972439381Escherichia coli 55989, complete genomeCopper resistance protein C precursor6e-32135
NC_009778:4188000:421772842177284218108381Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-32135
CU928145:3958572:397205939720593972439381Escherichia coli 55989 chromosome, complete genomeCopper resistance protein C precursor6e-32135
NC_014640:1179382:119630811963081196694387Achromobacter xylosoxidans A8 chromosome, complete genomecopper resistance protein C1e-30131
NC_009659:1923925:195478119547811955158378Janthinobacterium sp. Marseille chromosome, complete genomecopper resistance signal peptide protein C7e-30129
NC_009138:1518315:153877615387761539153378Herminiimonas arsenicoxydans, complete genomeCopper resistance protein C precursor CopC3e-29126
NC_010170:4800000:484576348457634846149387Bordetella petrii, complete genomeCopper resistance protein C precursor.1e-27121
NC_016147:586433:595473595473595856384Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative copper resistance protein3e-1063.9
NC_010943:2465976:247047124704712470854384Stenotrophomonas maltophilia K279a, complete genomeputative copper resistance protein4e-1063.2
NC_012912:2553391:256453625645362564916381Dickeya zeae Ech1591, complete genomecopper resistance protein CopC1e-0755.1
NC_008258:1873805:188908818890881889462375Shigella flexneri 5 str. 8401, complete genomehypothetical protein1e-0755.1
NC_016816:2073677:207678520767852077159375Pantoea ananatis LMG 5342, complete genomecopper resistance protein CopC2e-0754.3
NC_016589:2824164:285857028585702858944375Burkholderia sp. YI23 chromosome 1, complete sequencecopper resistance protein CopC1e-0651.6
NC_011083:1993672:201856320185632018937375Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,copper resistance protein CopC2e-0651.2
NC_006511:1063249:106719110671911067565375Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative cation resistance protein3e-0650.8
NC_011147:1057259:106120110612011061575375Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-0650.8
NC_014815:4491413:4496635449663544981431509Micromonospora sp. L5 chromosome, complete genomecopper resistance protein copc2e-0650.8
NC_009806:35990:550915509155909819Kineococcus radiotolerans SRS30216 plasmid pKRAD01, completecopper resistance protein CopC6e-0649.7
NC_011080:1944226:197516319751631975537375Salmonella enterica subsp. enterica serovar Newport str. SL254,copper resistance protein CopC6e-0649.7
NC_011205:1345511:134945313494531349827375Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-0649.7
NC_003197:1945858:196954219695421969916375Salmonella typhimurium LT2, complete genomeputative copper resistance protein6e-0649.3
NC_011094:1923870:194810319481031948477375Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein6e-0649.3
NC_016856:1957263:198094719809471981321375Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein6e-0649.3
NC_016860:1943203:196508319650831965457375Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein6e-0649.3
NC_016863:1905454:192913819291381929512375Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein6e-0649.3
NC_011294:1220526:122446212244621224842381Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein6e-0649.3
NC_012125:1897611:190154519015451901925381Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein6e-0649.3
NC_016810:1903426:192711019271101927490381Salmonella enterica subsp. enterica serovar Typhimurium strputative cation resistance protein6e-0649.3
NC_016857:1903426:192711019271101927490381Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein6e-0649.3
NC_017046:1902788:192647319264731926853381Salmonella enterica subsp. enterica serovar Typhimurium str. 798cation resistance protein6e-0649.3
NC_010102:1137247:114118911411891141563375Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-0649.3