Pre_GI: BLASTP Hits

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Query: NC_007482:607365:620550 Pseudoalteromonas haloplanktis TAC125 chromosome II, complete

Start: 620550, End: 621761, Length: 1212

Host Lineage: Pseudoalteromonas haloplanktis; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a sample of coastal sea water near a French Antarctic station. This organism is adapted to growth at low temperatures and reactive oxygen species by a number of putative dioxygenases and fatty acid desaturases amongst other proteins. The organism can grow optimally in salt concentrations of 1.5 to 3.5% NaCl.The genome consists of 2 chromosomes, one of which may replicate unidirectionally. Some interesting features of this genome include the lack of the nucleoid-associated gene hns, a lack of genes involved in molybdopterin metabolism, a lack of the cAMP-CAP complex, and a lack of the PEP-dependent PTS system.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020829:2754203:2762736276273627639051170Pseudomonas denitrificans ATCC 13867, complete genomesite-specific recombinase, phage integrase family protein2e-59230
NC_017986:5833819:5841338584133858426571320Pseudomonas putida ND6 chromosome, complete genomesite-specific recombinase, phage integrase family3e-58226
NC_004578:3193490:3209245320924532105491305Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family6e-53208
NC_004578:3193490:3213297321329732146311335Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family1e-52207
NC_016745:2229271:2237163223716322384521290Oceanimonas sp. GK1 chromosome, complete genomeintegrase family protein1e-46187
NC_008577:2511326:2527441252744125287361296Shewanella sp. ANA-3 chromosome 1, complete sequencephage integrase family protein8e-44178
NC_009052:2512373:2543022254302225443171296Shewanella baltica OS155, complete genomephage integrase family protein2e-43177
NC_016901:2594942:2599191259919126004861296Shewanella baltica OS678 chromosome, complete genomeintegrase family protein3e-43176
NC_009997:2635025:2639274263927426405691296Shewanella baltica OS195, complete genomeintegrase family protein3e-43176
NC_009092:2282437:2293640229364022949111272Shewanella loihica PV-4, complete genomephage integrase family protein4e-42172
NC_014541:2122788:2128465212846521297631299Ferrimonas balearica DSM 9799 chromosome, complete genomeintegrase family protein1e-41171
NC_009348:2125698:2153762215376221550391278Aeromonas salmonicida subsp. salmonicida A449, complete genomephage integrase3e-40166
NC_017986:5833819:584275258427525843708957Pseudomonas putida ND6 chromosome, complete genomeputative phage integrase1e-29130
NC_010678:642769:6427696427696439621194Ralstonia pickettii 12J chromosome 2, complete sequenceintegrase family protein3e-25116
NC_014394:942015:9603699603699623631995Gallionella capsiferriformans ES-2 chromosome, complete genomeintegrase family protein3e-22106
NC_010801:421906:4249834249834261251143Burkholderia multivorans ATCC 17616 chromosome 3, completetyrosine recombinase4e-22106
NC_016626:1825845:1859727185972718609681242Burkholderia sp. YI23 plasmid byi_1p, complete sequenceintegrase family protein4e-22106
NC_015383:368500:3828523828523840241173Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequenceintegrase family protein1e-21104
NC_016616:2768053:2776311277631127774891179Dechlorosoma suillum PS chromosome, complete genomesite-specific recombinase XerD1e-21104
NC_011662:2402408:2409839240983924110231185Thauera sp. MZ1T, complete genomeintegrase family protein3e-2099.8
NC_016002:2453919:2459603245960324607061104Pseudogulbenkiania sp. NH8B, complete genomephage integrase family protein2e-1997.1
NC_009254:745706:7473067473067489971692Burkholderia vietnamiensis G4 chromosome 3, complete sequencephage integrase family protein2e-1894
NC_010515:1678487:1720173172017317218641692Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceintegrase family protein9e-1891.7
NC_010682:1593108:1597420159742015995342115Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein7e-1788.6
NC_007434:2290934:2293652229365222953311680Burkholderia pseudomallei 1710b chromosome I, complete sequencephage integrase family protein2e-1687.4
NC_009254:637952:6588356588356605261692Burkholderia vietnamiensis G4 chromosome 3, complete sequencephage integrase family protein2e-1687
NC_007337:10464:1046410464121551692Ralstonia eutropha JMP134 plasmid 1, complete sequencephage integrase2e-1687
NC_014118:987889:1035939103593910376931755Burkholderia sp. CCGE1002 chromosome chromosome 2, completeintegrase family protein9e-1685.1
NC_015137:2582467:2587301258730125890131713Burkholderia sp. CCGE1001 chromosome 2, complete sequencehypothetical protein6e-1582
NC_015382:266000:2684922684922703271836Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequencePhage integrase family protein7e-1479
NC_008060:1346581:1350978135097813525011524Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage integrase1e-1377.8
NC_008544:818730:8313328313328330111680Burkholderia cenocepacia HI2424 chromosome 3, complete sequencephage integrase family protein1e-1377.8
NC_008061:2582000:2589264258926425909611698Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencephage integrase2e-1377.4
NC_008543:2666846:2676028267602826777251698Burkholderia cenocepacia HI2424 chromosome 2, complete sequencephage integrase family protein2e-1377
NC_012720:114489:1336191336191354541836Burkholderia glumae BGR1 plasmid bglu_3p, complete sequencePhage integrase family protein7e-1375.5
NC_010682:1913941:1915633191563319173331701Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein2e-1273.9
NC_013193:38918:4192241922431151194Candidatus Accumulibacter phosphatis clade IIA str. UW-1 plasmidhypothetical protein3e-1273.2
NC_010512:1015557:1029161102916110309031743Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceintegrase family protein7e-1272
NC_007510:1959883:2009443200944320112091767Burkholderia sp. 383 chromosome 1, complete sequencePhage integrase8e-1272
NC_017986:5797044:5807491580749158086001110Pseudomonas putida ND6 chromosome, complete genomeintegrase/recombinase3e-1169.7
NC_010801:550270:5524335524335539051473Burkholderia multivorans ATCC 17616 chromosome 3, completetyrosine recombinase4e-1169.7
NC_009254:637952:6512376512376527181482Burkholderia vietnamiensis G4 chromosome 3, complete sequencephage integrase family protein5e-1169.3
NC_009256:1782000:1783025178302517845061482Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage integrase family protein5e-1169.3
NC_008757:111292:1240721240721259461875Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completephage integrase family protein9e-1065.1
NC_014540:2933853:2935532293553229367011170Burkholderia sp. CCGE1003 chromosome 2, complete sequenceintegrase family protein1e-0861.6
NC_016783:1169821:118254811825481183483936Corynebacterium diphtheriae INCA 402 chromosome, complete genomesite-specific tyrosine recombinase XerD4e-0756.2
NC_013595:4951396:4960653496065349617801128Streptosporangium roseum DSM 43021, complete genomeSite-specific recombinase XerD-like protein6e-0652.4