Pre_GI: BLASTP Hits

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Query: NC_007347:1:11772 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 11772, End: 12521, Length: 750

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012796:4075583:416030941603094161064756Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-56218
NC_015379:6023926:603265360326536033618966Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein2e-47188
NC_004129:4434259:444774744477474448595849Pseudomonas fluorescens Pf-5, complete genomehypothetical protein2e-47188
NC_015576:1442713:144833114483311449320990Mycobacterium sp. JDM601 chromosome, complete genomeHNH endonuclease3e-36151
NC_016812:4246542:426405042640504264781732Sinorhizobium fredii HH103, complete genomehypothetical protein1e-28126
NC_016582:6999074:701308770130877013824738Streptomyces bingchenggensis BCW-1 chromosome, complete genomeHNH endonuclease2e-26119
NC_016002:1975000:198891019889101989800891Pseudogulbenkiania sp. NH8B, complete genomeHNH endonuclease2e-25115
NC_010334:2131939:213883721388372139706870Shewanella halifaxensis HAW-EB4, complete genomerestriction endonuclease-like protein1e-24113
NC_015957:336500:345618345618346355738Streptomyces violaceusniger Tu 4113 chromosome, complete genomeHNH endonuclease4e-24111
NC_007530:3462624:348605534860553486690636Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein3e-23108
NC_013061:1052957:1085865108586510869801116Pedobacter heparinus DSM 2366, complete genomerestriction endonuclease7e-1994.4
NC_014655:130636:154602154602155471870Leadbetterella byssophila DSM 17132 chromosome, complete genomehnh endonuclease3e-1892
NC_009485:5171658:518387251838725184723852Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein3e-1479
NC_008435:604772:626347626347627216870Rhodopseudomonas palustris BisA53, complete genomerestriction endonuclease-like protein3e-1478.6
NC_016822:1431200:144442814444281445171744Shigella sonnei 53G, complete genomeendonuclease8e-1373.9
NC_014306:1810548:181883218188321819554723Erwinia billingiae Eb661, complete genomepredicted endonuclease2e-1272.8
NC_014206:2807879:281779028177902818551762Geobacillus sp. C56-T3 chromosome, complete genomeHNH endonuclease2e-1272.8
NC_014973:3452100:346505734650573465821765Geobacter sp. M18 chromosome, complete genomeHNH endonuclease2e-1272.8
NC_010622:2385932:2397995239799523992901296Burkholderia phymatum STM815 chromosome 1, complete sequencerestriction endonuclease-like protein2e-1169.3
AP010958:922937:935324935324936064741Escherichia coli O103:H2 str. 12009 DNA, complete genomeendonuclease-like protein4e-1168.6
NC_013353:922937:935324935324936064741Escherichia coli O103:H2 str. 12009, complete genomeendonuclease4e-1168.6
NC_013364:928486:940873940873941613741Escherichia coli O111:H- str. 11128, complete genomeendonuclease-like protein4e-1168.6
NC_009485:584707:592423592423593280858Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein3e-1168.6
NC_012108:442493:4548374548374559641128Desulfobacterium autotrophicum HRM2, complete genomeputative 5-methylcytosine-specific restriction enzyme A9e-1167.4
NC_012673:2064298:2073393207339320744331041Exiguobacterium sp. AT1b, complete genomeHNH endonuclease2e-1066.6
NC_009512:3618055:362657136265713627377807Pseudomonas putida F1, complete genomeHNH endonuclease2e-1066.6
NC_013730:3729626:3748609374860937497121104Spirosoma linguale DSM 74, complete genomeHNH endonuclease2e-1066.2
NC_002516:891000:896416896416897228813Pseudomonas aeruginosa PAO1, complete genomehypothetical protein2e-1065.9
NC_008463:4743296:476014847601484760960813Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein3e-1065.9
NC_009138:1843998:185285518528551853664810Herminiimonas arsenicoxydans, complete genomeputative restriction endonuclease3e-1065.9
NC_010814:243384:261791261791262636846Geobacter lovleyi SZ, complete genomeHNH endonuclease4e-1065.1
NC_014934:219000:229015229015229824810Cellulophaga algicola DSM 14237 chromosome, complete genomehnh endonuclease8e-1064.3
NC_012731:600518:653235653235653873639Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-0963.5
NC_010498:4899167:490781649078164908457642Escherichia coli SMS-3-5, complete genomeHNH endonuclease domain-containing protein1e-0963.5
NC_006177:2398482:242404824240482424860813Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein2e-0962.8
NC_010571:637398:653983653983654768786Opitutus terrae PB90-1, complete genomerestriction endonuclease-like protein2e-0962.8
NC_014836:2620871:263431826343182635073756Desulfurispirillum indicum S5 chromosome, complete genomeHNH endonuclease3e-0962.4
NC_014216:2538500:255566525556652555979315Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomehypothetical protein5e-0961.6
NC_021184:1729867:1768097176809717693171221Desulfotomaculum gibsoniae DSM 7213, complete genomeputative restriction endonuclease5e-0961.6
NC_011283:4966471:497312949731294973767639Klebsiella pneumoniae 342 chromosome, complete genomeHNH endonuclease domain protein9e-0960.8
NC_017506:3248724:326074032607403261546807Marinobacter adhaerens HP15 chromosome, complete genomeHNH endonuclease9e-0960.8
NC_019896:3491000:350933435093343509681348Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein1e-0860.5
NC_014220:70490:896678966790407741Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeHNH endonuclease1e-0860.1
NC_008346:2523289:253364525336452534469825Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeHnh endonuclease2e-0859.3
NC_013361:5580741:558447255844725585122651Escherichia coli O26:H11 str. 11368 chromosome, complete genomeendonuclease2e-0859.3
NC_021150:4929670:493840049384004939143744Azotobacter vinelandii CA6, complete genomehypothetical protein3e-0858.9
NC_012560:4929683:493841349384134939156744Azotobacter vinelandii DJ, complete genomehypothetical protein3e-0858.9
NC_015942:1920693:193747819374781938242765Acidithiobacillus ferrivorans SS3 chromosome, complete genomeHNH endonuclease4e-0858.5
NC_009648:5119271:513275851327585133360603Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein4e-0858.5
NC_013730:3729626:375240937524093753212804Spirosoma linguale DSM 74, complete genomeHNH endonuclease7e-0857.8
NC_011206:1379068:138427413842741384912639Acidithiobacillus ferrooxidans ATCC 53993, complete genomerestriction endonuclease-like protein6e-0754.7