Pre_GI: BLASTP Hits

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Query: NC_007333:681924:690111 Thermobifida fusca YX, complete genome

Start: 690111, End: 691193, Length: 1083

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009973:178000:1911161911161922551140Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeserine/threonine protein kinase3e-57222
NC_014501:5775547:5793809579380957949031095Cyanothece sp. PCC 7822 chromosome, complete genomeserine/threonine protein kinase4e-45182
NC_016785:1586546:1604920160492016071122193Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeserine/threonine-protein kinase2e-1170.9
NC_016800:1639373:1657738165773816599302193Corynebacterium diphtheriae BH8 chromosome, complete genomeserine/threonine-protein kinase2e-1170.9
NC_016790:1581411:1599775159977516019672193Corynebacterium diphtheriae VA01 chromosome, complete genomeserine/threonine-protein kinase2e-1170.9
NC_016788:1609011:1627376162737616295682193Corynebacterium diphtheriae HC04 chromosome, complete genomeserine/threonine-protein kinase2e-1170.9
NC_016787:1605536:1623901162390116260932193Corynebacterium diphtheriae HC03 chromosome, complete genomeserine/threonine-protein kinase2e-1170.5
NC_016799:1667338:1685705168570516878972193Corynebacterium diphtheriae 31A chromosome, complete genomeserine/threonine-protein kinase2e-1170.5
NC_016783:1636820:1655188165518816573802193Corynebacterium diphtheriae INCA 402 chromosome, complete genomeserine/threonine-protein kinase2e-1170.5
NC_014623:1273025:1280043128004312813801338Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeprotein kinase4e-1169.3
NC_015711:8424144:8437890843789084413093420Myxococcus fulvus HW-1 chromosome, complete genomeserine/threonine protein kinase3e-1066.2
NC_015711:570910:5822505822505856693420Myxococcus fulvus HW-1 chromosome, complete genomeserine/threonine protein kinase3e-1066.2
NC_016582:6811273:6831115683111568322661152Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative serine/threonine protein kinase6e-1065.5
NC_013947:460398:4640054640054654771473Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeserine/threonine protein kinase1e-0964.7
NC_016025:807226:8085788085788104971920Candidatus Chloracidobacterium thermophilum B chromosome chromosomeserine/threonine protein kinase3e-0963.2
NC_018697:825058:8397118397118414321722Cycloclasticus sp. P1 chromosome, complete genomeProtein phosphatase 2C-like protein3e-0963.2
NC_008536:9538891:9563684956368495650841401Solibacter usitatus Ellin6076, complete genomeserine/threonine protein kinase3e-0963.2
NC_009338:817854:8382438382438395531311Mycobacterium gilvum PYR-GCK chromosome, complete genomeprotein kinase4e-0962.8
NC_014318:9120651:9127299912729991295242226Amycolatopsis mediterranei U32 chromosome, complete genomeserine/threonine protein kinase5e-0962.4
NC_017186:9120711:9127431912743191295842154Amycolatopsis mediterranei S699 chromosome, complete genomeserine/threonine protein kinase5e-0962.4
NC_014118:1528851:1545619154561915511175499Burkholderia sp. CCGE1002 chromosome chromosome 2, completemulti-sensor signal transduction multi-kinase6e-0962
NC_009338:817854:8395508395508414271878Mycobacterium gilvum PYR-GCK chromosome, complete genomeprotein kinase7e-0962
NC_010162:9502480:9518094951809495231905097Sorangium cellulosum 'So ce 56', complete genomeprotein kinase8e-0961.6
NC_014962:3440826:3442797344279734445151719Isosphaera pallida ATCC 43644 chromosome, complete genomeserine/threonine protein kinase1e-0861.2
NC_018515:3909646:3923616392361639254001785Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeserine/threonine protein kinase2e-0860.8
NC_015723:280368:3037783037783092855508Cupriavidus necator N-1 chromosome 2, complete sequencenodulation protein NodV1e-0860.8
NC_013441:27877:2654326543278801338Gordonia bronchialis DSM 43247, complete genomeSerine/threonine protein kinase-related protein1e-0860.8
NC_014118:2369669:2386536238653623921095574Burkholderia sp. CCGE1002 chromosome chromosome 2, completemulti-sensor signal transduction multi-kinase2e-0860.5
NC_013947:5431741:5451480545148054530361557Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeserine/threonine protein kinase with PASTA sensor(s)2e-0860.1
NC_016584:4905310:4918236491823649199871752Desulfosporosinus orientis DSM 765 chromosome, complete genomeprotein kinase family protein with PASTA domain2e-0860.1
NC_019892:6801246:6801246680124668026971452Singulisphaera acidiphila DSM 18658 chromosome, complete genomeserine/threonine protein kinase3e-0859.7
NC_008312:5105557:5118461511846151204491989Trichodesmium erythraeum IMS101, complete genomeserine/threonine protein kinase with TPR repeats3e-0859.7
NC_011757:1246000:1262756126275612644711716Methylobacterium chloromethanicum CM4, complete genomeserine/threonine protein kinase4e-0859.3
NC_020126:8287556:8301884830188483029301047Myxococcus stipitatus DSM 14675, complete genomeserine/threonine protein kinase4e-0859.3
NC_012988:1540587:1561069156106915627841716Methylobacterium extorquens DM4, complete genomedual serine/threonine-protein kinase/phosphatase5e-0859.3
NC_018750:3661243:3678491367849136796991209Streptomyces venezuelae ATCC 10712, complete genomeserine or threonine protein kinase6e-0858.9
NC_018697:825058:8423578423578440601704Cycloclasticus sp. P1 chromosome, complete genomeProtein phosphatase 2C-like protein6e-0858.5
NC_013929:3660321:3682183368218336837541572Streptomyces scabiei 87.22 chromosome, complete genomesensor kinase6e-0858.5
NC_010172:1222150:1235736123573612374511716Methylobacterium extorquens PA1, complete genomeprotein kinase6e-0858.5
NC_015437:1685824:1700510170051017019701461Selenomonas sputigena ATCC 35185 chromosome, complete genomeserine/threonine protein kinase9e-0858.2
NC_009004:2055563:2059160205916020610371878Lactococcus lactis subsp. cremoris MG1363, complete genomePknB protein1e-0757.8
NC_013947:5546315:5565010556501055667551746Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeserine/threonine protein kinase2e-0757.4
NC_013929:1799594:1799594179959418059476354Streptomyces scabiei 87.22 chromosome, complete genomeserine/threonine-protein kinase2e-0757.4
NC_020134:2237421:2239635223963522416412007Clostridium stercorarium subsp. stercorarium DSM 8532, completeserine/threonine-protein kinase Sps12e-0757.4
NC_015865:3657:2442624426274373012Thermococcus sp. 4557 chromosome, complete genomeSerine/threonine protein kinase S-layer protein2e-0757
NC_020291:3973084:3989626398962639910981473Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeserine/threonine protein kinase2e-0757
NC_000911:3075896:3082151308215130836681518Synechocystis sp. PCC 6803, complete genomeeukaryotic protein kinase2e-0757
NC_017039:3073724:3079979307997930814961518Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeeukaryotic protein kinase2e-0757
NC_017052:3073713:3079968307996830814851518Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeeukaryotic protein kinase2e-0757
NC_014623:5181000:5191275519127551926181344Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeprotein kinase2e-0757
NC_008312:5637974:5650391565039156523851995Trichodesmium erythraeum IMS101, complete genomeserine/threonine protein kinase with WD40 repeats2e-0757
NC_014657:944000:9487859487859506681884Caldicellulosiruptor owensensis OL chromosome, complete genomeserine/threonine protein kinase with pasta sensor(s)2e-0757
NC_012108:2975676:2980436298043629821991764Desulfobacterium autotrophicum HRM2, complete genomeputative serine/threonine protein kinase3e-0756.6
NC_018524:1745949:1745949174594917480002052Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomephosphotransferase enzyme family protein3e-0756.6
NC_014151:30488:2915729157304911335Cellulomonas flavigena DSM 20109 chromosome, complete genomeserine/threonine protein kinase3e-0756.6
NC_017093:6461486:6475678647567864767361059Actinoplanes missouriensis 431, complete genomeputative serine/threonine protein kinase2e-0756.6
NC_014484:762710:7782987782987801541857Spirochaeta thermophila DSM 6192 chromosome, complete genomeserine/threonine-protein kinase Sps14e-0756.2
NC_008536:2717891:2717891271789127205032613Solibacter usitatus Ellin6076, complete genomeserine/threonine protein kinase4e-0756.2
NC_021177:3997727:4004155400415540055911437Streptomyces fulvissimus DSM 40593, complete genomeSerine/threonine protein kinase4e-0755.8
NC_013510:465188:4773674773674795892223Thermomonospora curvata DSM 43183, complete genomeserine/threonine protein kinase with WD40 repeats5e-0755.8
NC_014623:1633889:1646537164653716480901554Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeserine/threonine kinase7e-0755.5
NC_015519:2413323:2414094241409424155571464Tepidanaerobacter sp. Re1 chromosome, complete genomeserine/threonine protein kinase with TPR repeats7e-0755.5
NC_013510:675368:6921666921666939351770Thermomonospora curvata DSM 43183, complete genomeserine/threonine protein kinase6e-0755.5
NC_003155:5302280:5302280530228053039741695Streptomyces avermitilis MA-4680, complete genomeserine/threonine protein kinase6e-0755.5
NC_019892:1675000:1695579169557916973151737Singulisphaera acidiphila DSM 18658 chromosome, complete genomeprotein kinase family protein5e-0755.5
NC_014814:859124:8591248591248605781455Mycobacterium sp. Spyr1 chromosome, complete genomeserine/threonine protein kinase9e-0755.1
NC_009338:5537473:5554380555438055558341455Mycobacterium gilvum PYR-GCK chromosome, complete genomeprotein kinase8e-0755.1
NC_007645:6955479:6974114697411469759281815Hahella chejuensis KCTC 2396, complete genomeSerine/threonine protein kinase8e-0755.1
NC_016790:31240:4216642166441872022Corynebacterium diphtheriae VA01 chromosome, complete genomeserine/threonine-protein kinase8e-0755.1
NC_015873:1901939:1922204192220419241201917Megasphaera elsdenii DSM 20460, complete genomekinase domain protein8e-0755.1
NC_016943:21364:4027640276422011926Blastococcus saxobsidens DD2, complete genomeTwo component serine/threonine-protein kinase with PASTA sensors7e-0755.1
NC_016801:36000:4361543615456242010Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeserine/threonine-protein kinase7e-0755.1
NC_007404:1776147:1791286179128617925631278Thiobacillus denitrificans ATCC 25259, complete genomeSerine/Threonine protein kinase1e-0654.7
NC_003155:5302280:5313395531339553153982004Streptomyces avermitilis MA-4680, complete genomeserine/threonine protein kinase1e-0654.7
NC_007929:653814:6592496592496609521704Lactobacillus salivarius subsp. salivarius UCC118, complete genome9e-0754.7
NC_018524:1745949:1750539175053917526202082Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomephosphotransferase enzyme family protein1e-0654.3
NC_015711:606306:6186696186696204561788Myxococcus fulvus HW-1 chromosome, complete genomeserine/threonine protein kinase1e-0654.3
NC_010830:692469:6969326969327038346903Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein1e-0654.3
NC_014960:1670778:1695286169528616963831098Anaerolinea thermophila UNI-1, complete genomeputative serine/threonine protein kinase2e-0654.3
NC_013947:6221877:6222747622274762242881542Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeserine/threonine protein kinase2e-0653.9
NC_010830:1291415:1298412129841213052306819Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-0653.9
NC_012804:903539:9283839283839303501968Thermococcus gammatolerans EJ3, complete genomeSerine/threonine protein kinase2e-0653.9
NC_018870:1417851:1441408144140814432371830Thermacetogenium phaeum DSM 12270 chromosome, complete genomeserine/threonine-protein kinase Sps2e-0653.9
NC_015573:569625:5824375824375869904554Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeserine/threonine protein kinase2e-0653.9
NC_016801:36000:4562145621471471527Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeserine/threonine-protein kinase2e-0653.9
NC_008148:2290806:2293947229394722958871941Rubrobacter xylanophilus DSM 9941, complete genomeserine/threonine protein kinase2e-0653.9
NC_002570:2616899:2621753262175326237471995Bacillus halodurans C-125, complete genomeserine/threonine protein kinase2e-0653.9
NC_019892:1113114:1122552112255211246422091Singulisphaera acidiphila DSM 18658 chromosome, complete genomeserine/threonine protein kinase2e-0653.9
NC_016790:31240:4418444184457101527Corynebacterium diphtheriae VA01 chromosome, complete genomeserine/threonine-protein kinase2e-0653.9
NC_014623:7550461:7564394756439475661391746Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeprotein kinase domain-containing protein2e-0653.5
NC_004113:1234048:1248084124808412503062223Thermosynechococcus elongatus BP-1, complete genomeserine/threonine protein kinase2e-0653.5
NC_015057:449699:4725434725434755993057Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequenceserine/threonine protein kinase2e-0653.5
NC_013757:21245:4205542055438991845Geodermatophilus obscurus DSM 43160, complete genomeserine/threonine protein kinase3e-0653.1
NC_010162:573709:5784915784915803021812Sorangium cellulosum 'So ce 56', complete genomeprotein kinase3e-0652.8
NC_012121:837586:8375868375868396282043Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative serine/threonine-protein kinase PknB4e-0652.8
NC_010162:900031:9000319000319026702640Sorangium cellulosum 'So ce 56', complete genomeprotein kinase4e-0652.8
NC_011145:4430501:4432435443243544358453411Anaeromyxobacter sp. K, complete genomeserine/threonine protein kinase4e-0652.8
NC_013132:3877500:3888256388825638903972142Chitinophaga pinensis DSM 2588, complete genomeserine/threonine protein kinase5e-0652.4
NC_018524:1745949:1754717175471717567442028Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomephosphotransferase enzyme family protein5e-0652.4
NC_019771:1356000:1365602136560213715925991Anabaena cylindrica PCC 7122, complete genomemulti-sensor signal transduction multi-kinase5e-0652.4