Pre_GI Gene

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Host: NC_010162 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010162:573709 Sorangium cellulosum 'So ce 56', complete genome

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5737095751721464prolipoprotein diacylglyceryl transferaseQuickGO ontologyBLASTP
575424576140717hypothetical protein
5761465776961551hypothetical proteinBLASTP
5784915803021812protein kinaseQuickGO ontologyBLASTP
58106558114076tRNA-ThrQuickGO ontology
58122958131385tRNA-TyrQuickGO ontologyBLASTP
58138558146076tRNA-GlyQuickGO ontologyBLASTP
58147458154976tRNA-ThrQuickGO ontology
5816025827921191elongation factor TuQuickGO ontologyBLASTP
582802582972171hypothetical proteinBLASTP
58300258307776tRNA-TrpQuickGO ontology
583393583791399preprotein translocase SecE subunitQuickGO ontology
583822584352531transcription antitermination protein NusGQuickGO ontologyBLASTP
58447058491344450S ribosomal protein L11QuickGO ontologyBLASTP
585059585769711hypothetical proteinBLASTP
58577358630353150S ribosomal protein L10QuickGO ontologyBLASTP
58640258678838750S ribosomal protein L7L12QuickGO ontologyBLASTP
5871525912884137DNA-directed RNA polymeraseQuickGO ontologyBLASTP
5914305957134284DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP