Pre_GI: BLASTP Hits

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Query: NC_007333:3244572:3259198 Thermobifida fusca YX, complete genome

Start: 3259198, End: 3260721, Length: 1524

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017341:903473:9230879230879243371251Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,cysteine desulfurase, SufS subfamily5e-2099.4
NC_016077:388941:4020674020674032871221Acidaminococcus intestini RyC-MR95 chromosome, complete genomecysteine desulfurase / selenocysteine lyase1e-1998.2
NC_014925:578759:5800955800955813361242Staphylococcus pseudintermedius HKU10-03 chromosome, completeCysteine desulfurase, SufS subfamily2e-1997.4
NC_007907:960104:9641729641729655301359Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-1995.5
NC_016620:3259749:3259749325974932609601212Bacteriovorax marinus SJ, complete genomeputative selenocysteine lyase8e-1995.5
NC_013922:1855000:1865685186568518669291245Natrialba magadii ATCC 43099 chromosome, complete genomecysteine desulfurase, SufS subfamily1e-1791.7
NC_016783:1274000:1297662129766212989421281Corynebacterium diphtheriae INCA 402 chromosome, complete genomecysteine desulfurase3e-1790.1
NC_004663:4373902:4390580439058043917911212Bacteroides thetaiotaomicron VPI-5482, complete genomeaminotransferase, putative cysteine desulfurase4e-1789.7
NC_016788:1214026:1272774127277412740541281Corynebacterium diphtheriae HC04 chromosome, complete genomecysteine desulfurase6e-1789.4
NC_016605:233087:2409432409432421781236Pediococcus claussenii ATCC BAA-344 chromosome, complete genomecysteine desulfurase SufS9e-1788.6
NC_016787:1240000:1262784126278412640641281Corynebacterium diphtheriae HC03 chromosome, complete genomecysteine desulfurase2e-1687.4
NC_016790:1218596:1240163124016312414431281Corynebacterium diphtheriae VA01 chromosome, complete genomecysteine desulfurase2e-1687.4
NC_016802:1256287:1274266127426612755461281Corynebacterium diphtheriae HC02 chromosome, complete genomecysteine desulfurase2e-1687.4
NC_015948:334000:3341023341023353491248Haloarcula hispanica ATCC 33960 chromosome chromosome I, completecysteine desulfurase2e-1687.4
NC_016801:1255611:1318496131849613197761281Corynebacterium diphtheriae C7 (beta) chromosome, complete genomecysteine desulfurase3e-1686.7
NC_008343:1470360:1472946147294614742291284Granulibacter bethesdensis CGDNIH1, complete genomecysteine desulfurase5e-1686.3
NC_020995:477765:4791024791024803461245Enterococcus casseliflavus EC20, complete genomeSufS family cysteine desulfurase9e-1685.5
NC_002935:1237585:1299675129967513009551281Corynebacterium diphtheriae NCTC 13129, complete genomeprobable cysteine desulfurase8e-1685.5
NC_016789:1295918:1317481131748113187611281Corynebacterium diphtheriae PW8 chromosome, complete genomecysteine desulfurase8e-1685.5
NC_016632:830000:8388368388368400621227Serratia symbiotica str. 'Cinara cedri' chromosome, completecysteine desulfurase / selenocysteine lyase1e-1585.1
NC_016799:1268706:1328819132881913300991281Corynebacterium diphtheriae 31A chromosome, complete genomecysteine desulfurase2e-1584.7
NC_016782:1251796:1273365127336512746451281Corynebacterium diphtheriae 241 chromosome, complete genomecysteine desulfurase2e-1584.7
NC_016785:1233384:1254952125495212562321281Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomecysteine desulfurase2e-1584.7
NC_016786:1251765:1273334127333412746141281Corynebacterium diphtheriae HC01 chromosome, complete genomecysteine desulfurase2e-1584.7
NC_016800:1243000:1301932130193213032121281Corynebacterium diphtheriae BH8 chromosome, complete genomecysteine desulfurase2e-1584.7
NC_013440:5944935:5952295595229559535061212Haliangium ochraceum DSM 14365, complete genomeaminotransferase class V5e-1582.8
NC_014624:224213:2349372349372361031167Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-1482
NC_010483:1467616:1466397146639714676381242Thermotoga sp. RQ2, complete genomecysteine desulfurase, SufS subfamily1e-1481.6
NC_013642:1425795:1426208142620814274491242Thermotoga naphthophila RKU-10, complete genomecysteine desulfurase, SufS subfamily1e-1481.6
NC_015690:1109335:1112982111298211142081227Paenibacillus mucilaginosus KNP414 chromosome, complete genomeCsd1e-1481.6
NC_015391:448833:4558924558924571301239Carnobacterium sp. 17-4 chromosome, complete genomecysteine desulfurase2e-1480.9
NC_009486:1403175:1401956140195614031971242Thermotoga petrophila RKU-1 chromosome, complete genomeSufS subfamily cysteine desulfurase3e-1480.1
NC_016935:1636278:1641033164103316422591227Paenibacillus mucilaginosus 3016 chromosome, complete genomeprotein Csd3e-1480.1
NC_013416:1588369:1593735159373515949311197Aggregatibacter actinomycetemcomitans D11S-1, complete genomeaminotransferase, class-V1e-1378.6
NC_013410:1285857:1307776130777613089991224Fibrobacter succinogenes subsp. succinogenes S85 chromosome,SufS subfamily cysteine desulfurase1e-1378.6
NC_012522:7596039:7633035763303576342941260Rhodococcus opacus B4, complete genomecysteine desulfurase/selenocysteine lyase1e-1378.6
NC_016513:1924242:1929665192966519308611197Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeclass-V aminotransferase1e-1378.6
NC_007517:2241104:2244290224429022454771188Geobacter metallireducens GS-15, complete genomeCysteine desulphurases, SufS1e-1378.2
NC_013192:519600:5282705282705294751206Leptotrichia buccalis DSM 1135, complete genomecysteine desulfurase, SufS subfamily2e-1377.4
NC_011884:3393500:3394330339433033955921263Cyanothece sp. PCC 7425, complete genomecysteine desulfurase, SufS subfamily2e-1377.4
NC_011772:4875893:4885637488563748868571221Bacillus cereus G9842, complete genomecysteine desulfurase SufS3e-1377
NC_006834:1414113:1435259143525914365031245Xanthomonas oryzae pv. oryzae KACC10331, complete genomecysteine desulfurase4e-1376.6
NC_007705:1388607:1409605140960514108491245Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomecysteine desulfurase4e-1376.6
NC_010717:3933485:3935508393550839367521245Xanthomonas oryzae pv. oryzae PXO99A, complete genomecysteine desulfurase4e-1376.6
NC_006155:652500:6586646586646599321269Yersinia pseudotuberculosis IP 32953, complete genomepossible conserved cysteine desulfurase5e-1376.3
NC_016932:1157587:1170474117047411717631290Corynebacterium pseudotuberculosis 316 chromosome, complete genomeCysteine desulfurase (SufS)-like protein6e-1375.9
NC_017303:1172656:1185545118554511868341290Corynebacterium pseudotuberculosis I19 chromosome, complete genomeCysteine desulfurase (SufS)-like protein1e-1275.5
NC_017301:1172660:1185542118554211868311290Corynebacterium pseudotuberculosis C231 chromosome, completeCysteine desulfurase (SufS)-like protein1e-1275.5
NC_017031:1172644:1185531118553111868201290Corynebacterium pseudotuberculosis P54B96 chromosome, completeCysteine desulfurase (SufS)-like protein1e-1275.5
NC_016781:1169632:1185674118567411868641191Corynebacterium pseudotuberculosis 3/99-5 chromosome, completecysteine desulfurase (SufS)-like protein1e-1275.1
NC_010184:4763932:4773890477389047751101221Bacillus weihenstephanensis KBAB4, complete genomecysteine desulfurase, SufS subfamily2e-1274.7
NC_009659:2849000:2866079286607928680401962Janthinobacterium sp. Marseille chromosome, complete genomeselenocysteine lyase2e-1274.3
NC_011969:4655602:4666781466678146680011221Bacillus cereus Q1 chromosome, complete genomeaminotransferase, class v, cysteine desulfhydrase2e-1273.9
NC_010634:635362:6412696412696425371269Yersinia pseudotuberculosis PB1/+, complete genomeSufS subfamily cysteine desulfurase4e-1273.2
NC_011832:1535740:1556156155615615588462691Candidatus Methanosphaerula palustris E1-9c, complete genomeaminotransferase class V4e-1273.2
NC_004459:1794540:1805348180534818065591212Vibrio vulnificus CMCP6 chromosome I, complete sequenceSelenocysteine lyase5e-1272.8
NC_009925:1184442:1200644120064412019061263Acaryochloris marina MBIC11017, complete genomecysteine desulfurase, SufS subfamily6e-1272.8
NC_014329:1169674:1185716118571611870051290Corynebacterium pseudotuberculosis FRC41 chromosome, completecysteine desulfurase7e-1272.4
NC_010830:1291415:1294440129444012956781239Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein1e-1171.6
NC_007907:4859735:4866749486674948679121164Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1171.2
NC_016616:2219486:2235829223582922377211893Dechlorosoma suillum PS chromosome, complete genomecysteine desulfurase-like protein, SufS subfamily2e-1170.9
NC_009483:2640403:2674608267460826757501143Geobacter uraniireducens Rf4 chromosome, complete genomecysteine desulfurase2e-1170.9
NC_007613:2699500:2699965269996527011701206Shigella boydii Sb227, complete genomehypothetical protein3e-1170.5
NC_014623:5661108:5663982566398256651721191Stigmatella aurantiaca DW4/3-1 chromosome, complete genomecysteine desulfurase family protein3e-1170.5
NC_017190:3166000:3182479318247931836991221Bacillus amyloliquefaciens LL3 chromosome, complete genomecysteine desulfurase3e-1170.5
NC_008702:369965:3915033915033933351833Azoarcus sp. BH72, complete genomeprobable cysteine desulphurase5e-1169.7
NC_010995:2547164:2566514256651425684301917Cellvibrio japonicus Ueda107, complete genomecysteine desulfurase, SufS subfamily8e-1168.9
NC_010498:3023442:3026637302663730278421206Escherichia coli SMS-3-5, complete genomecysteine desulfurase, catalytic subunit CsdA9e-1168.9
NC_014623:659422:6628836628836641241242Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeselenocysteine lyase1e-1068.2
NC_014643:1577021:1580441158044115817391299Rothia dentocariosa ATCC 17931 chromosome, complete genomecysteine desulfurase SufS3e-1067.4
NC_015737:449914:4675244675244687501227Clostridium sp. SY8519, complete genomeselenocysteine lyase3e-1067
NC_013361:3823347:3826541382654138277461206Escherichia coli O26:H11 str. 11368 chromosome, complete genomecysteine sulfinate desulfinase3e-1067
NC_011745:3197584:3200778320077832019831206Escherichia coli ED1a chromosome, complete genomecysteine sulfinate desulfinase4e-1066.6
NC_014328:3066628:3066628306662830677821155Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeselenocysteine lyase6e-1065.9
NC_013715:1750403:1764945176494517662431299Rothia mucilaginosa DY-18, complete genomeselenocysteine lyase2e-0964.7
NC_014727:1736500:1750004175000417512181215Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,cysteine sulfinate desulfinase/cysteine desulfurase related enzyme2e-0964.7
NC_019977:2141677:2162201216220121633821182Methanomethylovorans hollandica DSM 15978, complete genomeselenocysteine lyase3e-0963.5
NC_016627:1807866:1819036181903618201811146Clostridium clariflavum DSM 19732 chromosome, complete genomecysteine desulfurase4e-0963.5
NC_013440:1698047:1705649170564917069411293Haliangium ochraceum DSM 14365, complete genomeaminotransferase class V4e-0963.2
NC_015389:1298689:1326782132678213280381257Coriobacterium glomerans PW2 chromosome, complete genomecysteine desulfurase8e-0962.4
NC_006360:221345:2455092455092466541146Mycoplasma hyopneumoniae 232, complete genomenitrogen fixation protein class-V pyridoxal-phosphate aminotransferase8e-0962.4
NC_011283:1811000:1815929181592918174191491Klebsiella pneumoniae 342 chromosome, complete genomecysteine desulfurase, SufS family7e-0962.4
NC_014098:3372000:3375053337505333762041152Bacillus tusciae DSM 2912 chromosome, complete genomecysteine desulfurase family protein9e-0962
NC_002939:2008304:2044085204408520452271143Geobacter sulfurreducens PCA, complete genomeaminotransferase, class V3e-0860.5
NC_010572:6293417:6310832631083263122111380Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative aminotransferase6e-0859.7
NC_012669:549500:5649445649445664071464Beutenbergia cavernae DSM 12333, complete genomeCysteine desulfurase5e-0859.7
NC_015578:423000:4570854570854589621878Treponema primitia ZAS-2 chromosome, complete genomeputative cysteine desulfurase5e-0859.7
NC_013158:768000:7700977700977712001104Halorhabdus utahensis DSM 12940, complete genomeaminotransferase class V1e-0758.2
NC_021177:1922930:1925867192586719272461380Streptomyces fulvissimus DSM 40593, complete genomeAminotransferase3e-0757
NC_009832:4269804:4282581428258142838101230Serratia proteamaculans 568, complete genomecysteine desulfurase family protein1e-0655.1
NC_016602:2292518:2291308229130822925341227Vibrio furnissii NCTC 11218 chromosome 1, complete sequencecysteine desulfurase2e-0654.3