Pre_GI: BLASTP Hits

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Query: NC_007333:1457000:1471942 Thermobifida fusca YX, complete genome

Start: 1471942, End: 1472613, Length: 672

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015957:5225903:522605252260525226720669Streptomyces violaceusniger Tu 4113 chromosome, complete genomeDSBA oxidoreductase6e-70263
NC_014210:2597000:259704825970482597677630Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,DSBA oxidoreductase4e-64244
NC_008255:2839147:286447128644712865199729Cytophaga hutchinsonii ATCC 33406, complete genomedithiol-disulfide isomerase9e-53206
NC_017208:256163:277450277450278181732Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeFrnE protein2e-49195
NC_004193:375416:576373576373577089717Oceanobacillus iheyensis HTE831, complete genomepeptidoglycan hydrolase3e-48191
NC_001263:662666:670698670698671456759Deinococcus radiodurans R1 chromosome 1, complete sequencefrnE protein8e-48190
NC_014171:261952:278438278438279169732Bacillus thuringiensis BMB171 chromosome, complete genomeFrnE protein2e-47189
NC_016023:1725294:173568117356811736409729Bacillus coagulans 36D1 chromosome, complete genomeDSBA oxidoreductase3e-46185
NC_012914:5225609:524709652470965247812717Paenibacillus sp. JDR-2, complete genomeDSBA oxidoreductase7e-46183
NC_011365:1053178:106459810645981065320723Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeDSBA oxidoreductase3e-45181
NC_009848:2335265:233661323366132337338726Bacillus pumilus SAFR-032, complete genomeprotein disulfide-isomerase1e-44179
NC_010125:148500:157064157064157786723Gluconacetobacter diazotrophicus PAl 5, complete genomeputative polyketide synthase9e-45179
NC_015510:4065753:406731740673174068003687Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeDSBA oxidoreductase4e-43174
UCMB5137:2054735:209657320965732097301729Bacillus atrophaeus UCMB-5137putative sulfur oxido-reductase4e-40164
NC_014391:16188:439894398944621633Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeDSBA oxidoreductase2e-37155
NC_013159:1885985:188940918894091890065657Saccharomonospora viridis DSM 43017, complete genomepredicted dithiol-disulfide isomerase involved in polyketide biosynthesis2e-37155
NC_018704:176088:176088176088176804717Amphibacillus xylanus NBRC 15112, complete genomeputative oxidoreductase5e-37154
NC_021182:3771523:378085637808563781497642Clostridium pasteurianum BC1, complete genomeputative dithiol-disulfide isomerase involved in polyketide biosynthesis2e-36152
NC_009832:1280938:129198712919871292706720Serratia proteamaculans 568, complete genomeDSBA oxidoreductase1e-35149
NC_013595:7302888:730371273037127304407696Streptosporangium roseum DSM 43021, complete genomeDsbA oxidoreductase4e-35147
NC_007777:4892150:491333949133394914028690Frankia sp. CcI3, complete genomeDSBA oxidoreductase4e-33141
NC_013740:1081454:109453310945331095228696Acidaminococcus fermentans DSM 20731, complete genomeDSBA oxidoreductase2e-32138
NC_015434:5411:281172811728752636Verrucosispora maris AB-18-032 chromosome, complete genomeDSBA oxidoreductase1e-28126
NC_016745:2161408:216866621686662169313648Oceanimonas sp. GK1 chromosome, complete genomedithiol-disulfide isomerase3e-26118
NC_015759:726612:736885736885737538654Weissella koreensis KACC 15510 chromosome, complete genomeprotein-disulfide isomerase2e-25115
NC_007298:1129889:113536611353661136013648Dechloromonas aromatica RCB, complete genomeDSBA oxidoreductase7e-25114
NC_008314:2611873:263014926301492630808660Ralstonia eutropha H16 chromosome 2, complete sequencepredicted dithiol-disulfide isomerase1e-24113
NC_020908:1920169:193789519378951938551657Octadecabacter arcticus 238, complete genomeputative dsba oxidoreductase family protein2e-24112
NC_004578:4781326:480100748010074801705699Pseudomonas syringae pv. tomato str. DC3000, complete genomeisomerase, putative8e-23107
NC_015711:3193774:319836131983613198981621Myxococcus fulvus HW-1 chromosome, complete genomethioredoxin domain-containing protein8e-23107
NC_015856:764651:771185771185771841657Collimonas fungivorans Ter331 chromosome, complete genome2-hydroxychromene-2-carboxylate isomerase4e-23107
NC_014623:659422:677746677746678384639Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDSBA oxidoreductase family protein6e-1994
NC_008061:2153495:216270821627082163388681Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceDSBA oxidoreductase4e-1891.3
NC_008543:90312:106385106385107065681Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceDSBA oxidoreductase4e-1891.3
NC_008545:115292:126344126344127024681Burkholderia cenocepacia HI2424 plasmid 1, complete sequenceDSBA oxidoreductase6e-1890.9
NC_010515:1375091:140778614077861408466681Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceDSBA oxidoreductase6e-1890.9
NC_010552:335989:346229346229346909681Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceDSBA oxidoreductase7e-1890.5
NC_007510:1959883:197060119706011971266666Burkholderia sp. 383 chromosome 1, complete sequenceDSBA oxidoreductase8e-1890.5
NC_012791:2233098:224988622498862250566681Variovorax paradoxus S110 chromosome 1, complete genomeDSBA oxidoreductase1e-1789.7
NC_008390:2156188:217630221763022176976675Burkholderia cepacia AMMD chromosome 1, complete sequenceDSBA oxidoreductase6e-1684.3
NC_016628:763833:783925783925784338414Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceProtein-disulfide isomerase DsbC/DsbG2e-1479.3
NC_011768:3854455:385889238588923859509618Desulfatibacillum alkenivorans AK-01, complete genomeDSBA oxidoreductase7e-1167.4
NC_019974:298523:321021321021321653633Natronococcus occultus SP4, complete genomeputative dithiol-disulfide isomerase involved in polyketide biosynthesis2e-1066.2
NC_016111:6222461:624046762404676241126660Streptomyces cattleya NRRL 8057, complete genomedithiol-disulfide isomerase involved in polyketide biosynthesis4e-0651.6