Pre_GI: BLASTP Hits

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Query: NC_007333:1411050:1433476 Thermobifida fusca YX, complete genome

Start: 1433476, End: 1434111, Length: 636

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018750:4688968:469004446900444690676633Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein3e-37154
NC_010572:3363830:338349433834943384129636Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein1e-28126
NC_021177:4912982:491413949141394914774636Streptomyces fulvissimus DSM 40593, complete genomeNAD-dependent epimerase/dehydratase2e-28125
NC_018012:1628364:163386016338601634471612Thiocystis violascens DSM 198 chromosome, complete genomeputative NADH-flavin reductase1e-23109
NC_013406:3583474:360048436004843601116633Paenibacillus sp. Y412MC10 chromosome, complete genome3-beta hydroxysteroid dehydrogenase/isomerase2e-22105
NC_013222:1898164:191233119123311912996666Robiginitalea biformata HTCC2501, complete genomeputative flavin reductase2e-2099
NC_014315:2834000:283421028342102834842633Nitrosococcus watsoni C-113 chromosome, complete genomeNmrA family protein4e-2097.8
NC_013131:7530000:753081575308157531510696Catenulispora acidiphila DSM 44928, complete genomeNAD-dependent epimerase/dehydratase4e-2097.8
NC_016111:1:359435944091498Streptomyces cattleya NRRL 8057, complete genomeNAD-dependent epimerase/dehydratase6e-2097.4
NC_008209:1097607:109828710982871098916630Roseobacter denitrificans OCh 114, complete genomehypothetical protein3e-1892
NC_013729:1556922:157795515779551578650696Kribbella flavida DSM 17836, complete genomeNAD-dependent epimerase/dehydratase4e-1891.3
NC_008699:2294361:234216723421672342799633Nocardioides sp. JS614, complete genomeNmrA family protein2e-1789.4
NC_015690:1109335:116098211609821161602621Paenibacillus mucilaginosus KNP414 chromosome, complete genomeoxidoreductase2e-1685.9
NC_009439:918534:922213922213922854642Pseudomonas mendocina ymp, complete genome3-beta hydroxysteroid dehydrogenase/isomerase3e-1685.5
NC_016935:1636278:172807017280701728690621Paenibacillus mucilaginosus 3016 chromosome, complete genomeoxidoreductase7e-1684
NC_015656:381554:402369402369403064696Frankia symbiont of Datisca glomerata chromosome, complete genomeNAD-dependent epimerase/dehydratase7e-1684
NC_009921:3384116:338663933866393387334696Frankia sp. EAN1pec, complete genomeNAD-dependent epimerase/dehydratase9e-1580.1
NC_009254:442360:455051455051455704654Burkholderia vietnamiensis G4 chromosome 3, complete sequenceNmrA family protein1e-1479.7
NC_013132:3081806:309669030966903097361672Chitinophaga pinensis DSM 2588, complete genomehypothetical protein6e-1477.4
NC_015634:2779392:277939227793922780033642Bacillus coagulans 2-6 chromosome, complete genomeNAD(P)-binding Rossmann-fold domain-containing protein2e-1168.9
NC_018681:5627940:567427456742745674888615Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein2e-1065.9
NC_020410:495184:511514511514512152639Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeNAD(P)-binding domain / putative oxidoreductase2e-1065.9
NC_010516:359310:363302363302363940639Clostridium botulinum B1 str. Okra, complete genomehypothetical protein2e-1065.5
NC_019842:484933:508122508122508760639Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein2e-1065.5
NC_020911:4428000:444118344411834441815633Octadecabacter antarcticus 307, complete genomeputative NAD[P]-binding protein3e-1065.5
NC_019673:3726519:373858037385803739227648Saccharothrix espanaensis DSM 44229 complete genomeNAD-dependent epimerase/dehydratase5e-1064.3
NC_013235:593289:605376605376606047672Nakamurella multipartita DSM 44233, complete genomeNAD-dependent glycerol-3-phosphate dehydrogenase domain protein8e-1063.5
NC_008595:1844500:184782818478281848472645Mycobacterium avium 104, complete genomehypothetical protein1e-0963.2
NC_009725:496443:512691512691513329639Bacillus amyloliquefaciens FZB42, complete genomeYwnB1e-0963.2
NC_016582:1639375:165877516587751659419645Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTrkA domain-containing protein4e-0961.6
NC_008699:2294361:233511623351162335757642Nocardioides sp. JS614, complete genomeNmrA family protein6e-0960.8
NC_015957:7348269:739521373952137395821609Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein1e-0756.6
NC_002488:1638946:166617116661711666812642Xylella fastidiosa 9a5c, complete genomehypothetical protein1e-0756.6
NC_019973:1731626:175381517538151754426612Mesorhizobium australicum WSM2073, complete genomeputative NADH-flavin reductase3e-0755.5
NC_002678:2739829:274306327430632743674612Mesorhizobium loti MAFF303099, complete genomehypothetical protein5e-0754.3
NC_015675:1721543:174372417437241744335612Mesorhizobium opportunistum WSM2075 chromosome, complete genomeSaccharopine dehydrogenase8e-0753.9
NC_007516:2037477:203825420382542038940687Synechococcus sp. CC9605, complete genomehypothetical protein9e-0753.5
NC_009664:63230:849598495985597639Kineococcus radiotolerans SRS30216, complete genomehypothetical protein1e-0653.1
NC_014623:5181000:518431151843115185081771Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeNADH-flavin reductase-like protein2e-0652.4
NC_013743:1450417:145041714504171451055639Haloterrigena turkmenica DSM 5511, complete genomeNAD-dependent epimerase/dehydratase3e-0652
NC_013592:3212834:324281432428143243584771Dickeya dadantii Ech586, complete genomeNmrA family protein5e-0651.2