Pre_GI: BLASTP Hits

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Query: NC_006905:3780000:3780133 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 3780133, End: 3780714, Length: 582

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011601:3951324:396715639671563967719564Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome3-methyladenine DNA glycosylase1e-95348
NC_008258:3581583:360675036067503607478729Shigella flexneri 5 str. 8401, complete genome3-methyl-adenine DNA glycosylase I, constitutive8e-95345
NC_004337:3590323:368415636841563684719564Shigella flexneri 2a str. 301, complete genome3-methyl-adenine DNA glycosylase I3e-92337
NC_015968:204969:207683207683208264582Enterobacter asburiae LF7a chromosome, complete genomeDNA-3-methyladenine glycosylase I2e-91334
NC_015224:4473230:448038744803874480959573Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,DNA-3-methyladenine glycosylase1e-78292
NC_009617:3263413:328559732855973286169573Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeDNA-3-methyladenine glycosylase I3e-61234
NC_009092:4585784:126041260413173570Shewanella loihica PV-4, complete genomeDNA-3-methyladenine glycosylase I4e-61233
NC_002939:579087:597360597360597935576Geobacter sulfurreducens PCA, complete genomeDNA-3-methyladenine glycosylase I4e-55214
NC_013204:1759985:176291717629171763489573Eggerthella lenta DSM 2243, complete genomeDNA-3-methyladenine glycosylase I7e-55213
NC_015555:49842:859658596586537573Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeDNA-3-methyladenine glycosylase I2e-54211
NC_019970:35985:726367263673196561Thermoanaerobacterium thermosaccharolyticum M0795, complete genome3-methyladenine DNA glycosylase1e-53209
NC_014410:51711:861848618486744561Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA-3-methyladenine glycosylase I1e-53209
NC_014972:1126426:112642611264261127034609Desulfobulbus propionicus DSM 2032 chromosome, complete genomeDNA-3-methyladenine glycosylase I1e-53208
NC_015738:1707173:172952117295211730099579Eggerthella sp. YY7918, complete genomehypothetical protein2e-53208
NC_014623:7133149:715337471533747153991618Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDNA-3-methyladenine glycosylase i4e-52204
NC_011313:871445:871445871445872005561Aliivibrio salmonicida LFI1238 chromosome 2, complete sequenceDNA-3-methyladenine glycosylase I3e-52204
NC_003869:74836:951009510095666567Thermoanaerobacter tengcongensis MB4, complete genome3-Methyladenine DNA glycosylase5e-52203
NC_004193:375416:565839565839566417579Oceanobacillus iheyensis HTE831, complete genome3-methyladenine-DNA glycosylase I1e-51202
NC_010321:2207364:221396522139652214537573Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeDNA-3-methyladenine glycosylase I5e-51200
NC_010320:33814:545595455955131573Thermoanaerobacter sp. X514 chromosome, complete genomeDNA-3-methyladenine glycosylase I5e-51200
NC_014964:2199252:220111022011102201682573Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeDNA-3-methyladenine glycosylase I5e-51200
NC_014538:73272:944249442494996573Thermoanaerobacter sp. X513 chromosome, complete genomeDNA-3-methyladenine glycosylase I5e-51200
NC_014733:1223359:123619412361941236766573Methylovorus sp. MP688 chromosome, complete genomeDNA-3-methyladenine glycosylase i6e-48190
NC_002516:6255854:135401354014091552Pseudomonas aeruginosa PAO1, complete genomeDNA-3-methyladenine glycosidase I3e-46184
NC_013517:2413373:242573824257382426298561Sebaldella termitidis ATCC 33386, complete genomeDNA-3-methyladenine glycosylase I4e-46184
NC_015760:61345:643916439164945555Streptococcus salivarius CCHSS3, complete genomeDNA-3-methyladenine glycosylase9e-46182
NC_016935:4038265:405901040590104059618609Paenibacillus mucilaginosus 3016 chromosome, complete genome3-methyladenine DNA glycosylase2e-45181
NC_015690:3477573:349910134991013499709609Paenibacillus mucilaginosus KNP414 chromosome, complete genome3-methyladenine DNA glycosylase2e-45181
NC_002927:4392768:441421844142184414877660Bordetella bronchiseptica RB50, complete genomeputative hydrolase1e-44179
NC_006448:59654:626976269763251555Streptococcus thermophilus LMG 18311, complete genome3-methyladenine DNA glycosylase I7e-45179
NC_020209:4768500:480666448066644807221558Pseudomonas poae RE*1-1-14, complete genomeputative DNA-3-methyladenine glycosidase I4e-44177
NC_013209:2536500:255330725533072553870564Acetobacter pasteurianus IFO 3283-01, complete genomeDNA-3-methyladenine glycosylase I1e-43175
NC_017100:2538461:255451425545142555077564Acetobacter pasteurianus IFO 3283-03, complete genomeDNA-3-methyladenine glycosylase I1e-43175
NC_017108:2535798:255185125518512552414564Acetobacter pasteurianus IFO 3283-12, complete genomeDNA-3-methyladenine glycosylase I1e-43175
NC_017111:2535000:255186925518692552432564Acetobacter pasteurianus IFO 3283-32, complete genomeDNA-3-methyladenine glycosylase I1e-43175
NC_017121:2535803:255185625518562552419564Acetobacter pasteurianus IFO 3283-07, complete genomeDNA-3-methyladenine glycosylase I1e-43175
NC_017125:2538441:255449425544942555057564Acetobacter pasteurianus IFO 3283-22, complete genomeDNA-3-methyladenine glycosylase I1e-43175
NC_017146:2538483:255453625545362555099564Acetobacter pasteurianus IFO 3283-26, complete genomeDNA-3-methyladenine glycosylase I1e-43175
NC_013169:612456:644768644768645403636Kytococcus sedentarius DSM 20547, complete genomeDNA-3-methyladenine glycosylase I3e-39161
NC_012214:745302:761471761471762115645Erwinia pyrifoliae Ep1/96, complete genomeDNA-3-methyladenine glycosylase I2e-38158
NC_013971:666730:683412683412684056645Erwinia amylovora ATCC 49946 chromosome, complete genomeDNA methyladenine glycosylase6e-38156
NC_013961:3083816:308732630873263087970645Erwinia amylovora, complete genomeDNA-3-methyladenine glycosylase I6e-38156
NC_015737:449914:4540634540634552861224Clostridium sp. SY8519, complete genome3-Methyladenine DNA glycosylase7e-38156
NC_015500:1923514:192973419297341930324591Treponema brennaborense DSM 12168 chromosome, complete genomeDNA-3-methyladenine glycosylase I6e-37153
NC_009802:1659257:167644416764441677001558Campylobacter concisus 13826, complete genome50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12)2e-36151
NC_015436:1758257:176932117693211769893573Spirochaeta coccoides DSM 17374 chromosome, complete genomeDNA-3-methyladenine glycosylase I1e-35149
NC_015859:1099919:110366411036641104170507Corynebacterium variabile DSM 44702 chromosome, complete genomeDNA-3-methyladenine glycosidase I8e-35146
NC_013198:511795:531024531024531599576Lactobacillus rhamnosus GG, complete genomeDNA-3-methyladenine glycosylase 1 (Tag1)9e-35146
NC_015913:1248000:125552012555201256086567Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeDNA-3-methyladenine glycosylase I1e-34146
NC_007164:62816:803098030980989681Corynebacterium jeikeium K411, complete genomeDNA-3-methyladenine glycosidase I4e-33140
NC_017317:134671:141006141006141674669Corynebacterium ulcerans 809 chromosome, complete genomeDNA-3-methyladenine glycosidase I1e-32139
NC_004668:241352:264740264740265252513Enterococcus faecalis V583, complete genomeDNA-3-methyladenine glycosylase I9e-24109
NC_006449:58436:617896178962034246Streptococcus thermophilus CNRZ1066, complete genome3-methyladenine DNA glycosylase I, truncated1e-1376.3
NC_006449:58436:614796147961655177Streptococcus thermophilus CNRZ1066, complete genome3-methyladenine DNA glycosylase I, truncated1e-1169.7
NC_006371:1973500:197695919769591977192234Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical protein1e-0963.2
NC_011770:4542183:454360345436034544274672Pseudomonas aeruginosa LESB58, complete genomehypothetical protein4e-0754.3
NC_008463:4342119:434353943435394344210672Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein4e-0754.3