Pre_GI: BLASTP Hits

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Query: NC_006905:3717306:3734137 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 3734137, End: 3735786, Length: 1650

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:3655876:3673171367317136748201650Shigella flexneri 2002017 chromosome, complete genomeCytoplasmic trehalase0994
NC_004337:3590323:3638315363831536399641650Shigella flexneri 2a str. 301, complete genomecytoplasmic trehalase0994
NC_004337:3621985:3638315363831536399641650Shigella flexneri 2a str. 301, complete genomecytoplasmic trehalase0994
NC_004741:4132056:4133529413352941351781650Shigella flexneri 2a str. 2457T, complete genomecytoplasmic trehalase0994
NC_014121:5000069:5027278502727850289271650Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetrehalase0959
NC_013716:1918664:1939340193934019410461707Citrobacter rodentium ICC168, complete genomeperiplasmic trehalase2e-143509
NC_016816:2782373:2797430279743027991151686Pantoea ananatis LMG 5342, complete genomeperiplasmic trehalase precursor TreA6e-140498
NC_007435:2701242:2728052272805227303822331Burkholderia pseudomallei 1710b chromosome II, complete sequencetrehalase5e-138491
NC_009075:937782:9642489642489661191872Burkholderia pseudomallei 668 chromosome II, complete sequencetrehalase2e-137489
NC_009078:862796:8902918902918919881698Burkholderia pseudomallei 1106a chromosome II, complete sequencetrehalase2e-137489
NC_006351:881655:9091759091759108721698Burkholderia pseudomallei K96243 chromosome 2, complete sequencetrehalase4e-137488
NC_010694:2189652:2189652218965221913251674Erwinia tasmaniensis, complete genomePeriplasmic trehalase3e-134479
NC_010336:1468760:1482468148246814839251458Francisella philomiragia subsp. philomiragia ATCC 25017, completeAlpha,alpha-trehalase5e-105382
NC_008601:1404933:1406119140611914075731455Francisella tularensis subsp. novicida U112, complete genometrehalase3e-99363
NC_007880:1079634:1093524109352410945701047Francisella tularensis subsp. holarctica, complete genomeTrehalase, pseuodgene9e-67254
NC_011726:1456585:1459551145955114610951545Cyanothece sp. PCC 8801, complete genomeAlpha,alpha-trehalase9e-50198
NC_014963:5034904:5040130504013050416831554Terriglobus saanensis SP1PR4 chromosome, complete genomealpha,alpha-trehalase3e-47190
NC_015311:1157679:1158684115868411600241341Prevotella denticola F0289 chromosome, complete genomealpha,alpha-trehalase2e-41171
NC_007880:1079634:109309010930901093644555Francisella tularensis subsp. holarctica, complete genomeAlpha,alpha-trehalase.2e-24114