Pre_GI: BLASTP Hits

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Query: NC_006905:3717306:3731939 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 3731939, End: 3732913, Length: 975

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015389:809474:835542835542836510969Coriobacterium glomerans PW2 chromosome, complete genomesugar isomerase (SIS)1e-40167
NC_014376:4369666:437133343713334372331999Clostridium saccharolyticum WM1 chromosome, complete genomesugar isomerase (SIS)2e-20100
NC_002607:3322:5646564674511806Halobacterium sp. NRC-1, complete genomeGlmS3e-1066.2
NC_010364:3322:5646564674511806Halobacterium salinarum R1, complete genomeglutamine--fructose-6-phosphate aminotransferase (isomerizing)3e-1066.2
NC_016751:1700164:1710223171022317120491827Marinitoga piezophila KA3 chromosome, complete genomeglucosamine--fructose-6-phosphate aminotransferase6e-1065.5
NC_010003:2029416:2030412203041220322501839Petrotoga mobilis SJ95, complete genomeglucosamine--fructose-6-phosphate aminotransferase, isomerizing2e-0963.5
NC_018704:433402:4512904512904531191830Amphibacillus xylanus NBRC 15112, complete genomeglucosamine-6-phosphate synthase2e-0963.5
NC_006396:1380882:1425526142552614265601035Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceglucosamine-fructose-6-phosphate aminotransferase2e-0860.1
NC_013743:1281500:1283093128309312848831791Haloterrigena turkmenica DSM 5511, complete genomeglucosamine/fructose-6-phosphate aminotransferase, isomerizing2e-0860.1
NC_014973:243000:2444742444742463031830Geobacter sp. M18 chromosome, complete genomeglucosamine/fructose-6-phosphate aminotransferase, isomerizing4e-0858.9
NC_015565:287900:2935182935182953471830Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeglucosamine--fructose-6-phosphate aminotransferase4e-0858.9
NC_012804:348235:3690893690893701051017Thermococcus gammatolerans EJ3, complete genomeGlucosamine--fructose-6-phosphate aminotransferase, sugar isomerase (SIS) domain (glmS)2e-0757
NC_015145:2942500:2942610294261029444961887Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome3e-0756.6
NC_009376:1579332:1598771159877116005791809Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeglucosamine--fructose-6-phosphate aminotransferase3e-0756.2
NC_003155:5987000:6011012601101260128591848Streptomyces avermitilis MA-4680, complete genomeD-fructose-6-phosphate amidotransferase4e-0755.8
NC_015151:1427965:1450471145047114514721002Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeglutamine amidotransferase class-II4e-0755.8
NC_010730:1724443:1737947173794717397611815Sulfurihydrogenibium sp. YO3AOP1, complete genomeglucosamine/fructose-6-phosphate aminotransferase, isomerizing7e-0755.1
NC_011886:2950411:2952630295263029545221893Arthrobacter chlorophenolicus A6, complete genomeglucosamine/fructose-6-phosphate aminotransferase, isomerizing8e-0754.7
NC_004557:2677155:2700348270034827021801833Clostridium tetani E88, complete genomeD-fructose-6-phosphate amidotransferase9e-0754.7
NC_014387:993013:1012573101257310144411869Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeglucosamine-fructose-6-phosphate aminotransferase GlmS12e-0653.9
NC_009699:3753599:3753599375359937554251827Clostridium botulinum F str. Langeland chromosome, complete genomeglucosamine--fructose-6-phosphate aminotransferase2e-0653.9
NC_017297:3752000:3752212375221237540381827Clostridium botulinum F str. 230613 chromosome, complete genomeglucosamine--fructose-6-phosphate aminotransferase2e-0653.9
NC_021184:592501:6059266059266077551830Desulfotomaculum gibsoniae DSM 7213, complete genomeglucosamine--fructose-6-phosphate aminotransferase, isomerizing2e-0653.9
NC_018876:2563725:2575202257520225770341833Methanolobus psychrophilus R15 chromosome, complete genomeglutamine--fructose-6-phosphate transaminase3e-0653.1
NC_015437:816719:8167198167198185481830Selenomonas sputigena ATCC 35185 chromosome, complete genomeglucosamine/fructose-6-phosphate aminotransferase, isomerizing3e-0652.8
NC_011830:923424:9308819308819327041824Desulfitobacterium hafniense DCB-2, complete genomeglucosamine/fructose-6-phosphate aminotransferase, isomerizing3e-0652.8
NC_010830:1836984:1839638183963818414731836Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-0652.8
NC_015385:2505977:2541079254107925429201842Treponema succinifaciens DSM 2489 chromosome, complete genomeGlucosamine--fructose-6-phosphate aminotransferase (isomerizing)6e-0652