Pre_GI: BLASTP Hits

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Query: NC_006905:3717306:3717306 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 3717306, End: 3718064, Length: 759

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016822:3923908:394061339406133941365753Shigella sonnei 53G, complete genomeputative methyltransferase1e-135482
NC_007384:3897000:391373239137323914484753Shigella sonnei Ss046, complete genomehypothetical protein1e-135482
NC_004741:4132056:415503041550304155782753Shigella flexneri 2a str. 2457T, complete genomehypothetical protein1e-135482
NC_011748:3983432:400718840071884007940753Escherichia coli 55989, complete genomeputative methyltransferase1e-135482
CU928145:3983432:400718840071884007940753Escherichia coli 55989 chromosome, complete genomeputative SAM-dependent methyltransferase1e-135482
NC_004337:3590323:361806636180663618818753Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-135482
CP002185:3822470:383786038378603838612753Escherichia coli W, complete genomepredicted SAM-dependent methyltransferase1e-135482
NC_010473:3722571:373814837381483738900753Escherichia coli str. K-12 substr. DH10B, complete genomepredicted SAM-dependent methyltransferase2e-135481
NC_010468:231000:250324250324251076753Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF5482e-135481
NC_007613:3470314:348734034873403488092753Shigella boydii Sb227, complete genomehypothetical protein2e-135481
NC_000913:3624826:364040336404033641155753Escherichia coli K12, complete genomepredicted SAM-dependent methyltransferase2e-135481
AC_000091:3995233:399728339972833998035753Escherichia coli W3110 DNA, complete genomepredicted SAM-dependent methyltransferase2e-135481
NC_010498:3838419:385380538538053854557753Escherichia coli SMS-3-5, complete genomehypothetical protein2e-135481
NC_011751:4074586:408997240899724090724753Escherichia coli UMN026 chromosome, complete genomeputative methyltransferase2e-135481
NC_012947:248000:267354267354268106753Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completemethyltransferase2e-135481
NC_012967:3549880:357307035730703573822753Escherichia coli B str. REL606 chromosome, complete genomeputative methyltransferase2e-135481
NC_013941:4249871:426528342652834266035753Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-135481
NC_014121:5000069:502181250218125022549738Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative methyltransferase6e-130463
NC_009778:4188000:419011741901174190869753Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-124444
NC_010634:4463727:449636244963624497132771Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein7e-103373
NC_009092:4337617:434887443488744349653780Shewanella loihica PV-4, complete genomeprotein of unknown function DUF5484e-84311
NC_009901:4899535:491611549161154916876762Shewanella pealeana ATCC 700345, complete genomeprotein of unknown function DUF5483e-80298
NC_012913:1867276:186944118694411870196756Aggregatibacter aphrophilus NJ8700, complete genomeDNA polymerase I4e-77288
NC_013416:16493:330983309833856759Aggregatibacter actinomycetemcomitans D11S-1, complete genomeDNA polymerase I5e-77287
NC_016513:317197:335475335475336167693Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA polymerase I6e-73273
NC_010995:1139867:115746611574661158266801Cellvibrio japonicus Ueda107, complete genomehypothetical protein1e-48193
NC_014221:1167261:118301111830111183811801Truepera radiovictrix DSM 17093 chromosome, complete genomeprotein of unknown function DUF5483e-45181
NC_009667:1076718:109392110939211094538618Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencehypothetical protein9e-36150
NC_003116:1734000:175083717508371751589753Neisseria meningitidis Z2491, complete genomehypothetical protein6e-34144