Pre_GI: BLASTP Hits

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Query: NC_006856:26438:28215 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 28215, End: 29207, Length: 993

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:4055117:408191340819134082773861Salmonella enterica subsp. enterica serovar Typhimurium strTniB protein8e-133473
NC_009140:121107:139976139976140836861Salmonella enterica enterica sv Newport str. SL254, completetransposition protein TniB8e-133473
NC_009349:78000:885768857689475900Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTniB protein2e-131468
NC_007973:3240866:326500332650033265911909Ralstonia metallidurans CH34 chromosome 1, complete sequenceTniB7e-127453
NC_016616:2644883:264932926493292650237909Dechlorosoma suillum PS chromosome, complete genomeTniB protein5e-125447
NC_017986:1885613:188751118875111888419909Pseudomonas putida ND6 chromosome, complete genomeTniB2e-118426
NC_013235:3913000:392961439296143930540927Nakamurella multipartita DSM 44233, complete genomeTniB family protein1e-90333
NC_019673:6394319:640423764042376405181945Saccharothrix espanaensis DSM 44229 complete genomeputative ATP-binding protein2e-88325
NC_008782:1277117:129833512983351299231897Acidovorax sp. JS42, complete genomeTniB family protein3e-53209
NC_007498:134442:152958152958153854897Pelobacter carbinolicus DSM 2380, complete genomeputative NTP-binding protein TniB8e-52204
NC_016616:915755:939036939036939932897Dechlorosoma suillum PS chromosome, complete genomeTniB protein3e-50199
NC_009348:1064664:107488910748891075785897Aeromonas salmonicida subsp. salmonicida A449, complete genomeTniB1e-49197
NC_009254:637952:693592693592694461870Burkholderia vietnamiensis G4 chromosome 3, complete sequenceTniB family protein2e-47189
NC_011002:703194:747564747564748433870Burkholderia cenocepacia J2315 chromosome 3, complete sequenceputative TniB-like transposition protein4e-47188
NC_014752:1063506:107352410735241074417894Neisseria lactamica ST-640, complete genomeNTP-binding protein TniB2e-46186
NC_008543:90312:101450101450102319870Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceTniB family protein1e-42173
NC_008061:2153495:216745421674542168323870Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceTniB1e-42173
NC_012440:1215838:123516112351611236072912Persephonella marina EX-H1, complete genomeputative transposon, transposition helper protein C2e-37156
NC_013166:32474:378893788938743855Kangiella koreensis DSM 16069, complete genomeTniB family protein2e-36152
NC_010682:3033646:305061830506183051523906Ralstonia pickettii 12J chromosome 1, complete sequenceTniB family protein6e-35148
NC_010682:1763769:177063117706311771536906Ralstonia pickettii 12J chromosome 1, complete sequenceTniB family protein6e-35148
NC_010682:1652636:166869116686911669596906Ralstonia pickettii 12J chromosome 1, complete sequenceTniB family protein6e-35148
NC_012856:2633890:264903026490302649935906Ralstonia pickettii 12D chromosome 1, complete genomeTniB family protein2e-34146
NC_012856:207194:213242213242214132891Ralstonia pickettii 12D chromosome 1, complete genomeTniB family protein2e-34146
NC_011761:2217632:222835722283572229241885Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completetransposon transposition helper protein C3e-32139
NC_002678:5060670:509033250903325091210879Mesorhizobium loti MAFF303099, complete genomeNTP-binding protein4e-32139
NC_007912:231817:237775237775238656882Saccharophagus degradans 2-40, complete genomeUrease, alpha subunit5e-32138
NC_010410:3606826:369257436925743693497924Acinetobacter baumannii AYE, complete genomeputative transposition helper protein5e-32138
NC_020409:2222000:222763722276372228452816Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Transposon, transposition helper protein C1e-30133
NC_010939:405477:422658422658423545888Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTransposition helper protein1e-28127
NC_007575:1663088:166892716689271669868942Sulfurimonas denitrificans DSM 1251, complete genomeTniB2e-28126
NC_007517:3430237:343701834370183437929912Geobacter metallireducens GS-15, complete genomeTniB2e-27123
NC_010120:1065833:107628610762861077158873Neisseria meningitidis 053442, complete genomeputative ATP-binding protein5e-25115
NC_015161:1748236:1757391175739117591501760Deinococcus proteolyticus MRP chromosome, complete genome9e-21101
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete1e-1894
NC_014836:2919508:837583758734360Desulfurispirillum indicum S5 chromosome, complete genomeNTP-binding protein2e-1893.6
NC_005773:208000:220514220514221149636Pseudomonas syringae pv. phaseolicola 1448A, complete genometransposition helper protein, truncated2e-1893.6
NC_017171:1331794:134745513474551348006552Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeNTP-binding protein3e-1892.8
NC_011586:268927:285182285182285691510Acinetobacter baumannii AB0057 chromosome, complete genomeNTP-binding protein4e-1892.4
NC_017387:247462:269556269556270065510Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeNTP-binding protein4e-1892.4
NC_017387:247462:280390280390280899510Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeNTP-binding protein4e-1892.4
NC_012988:2507142:250714225071422508020879Methylobacterium extorquens DM4, complete genomeATP-binding protein TniB6e-1788.6
NC_017387:247462:249377249377249892516Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeputative transposition helper protein2e-1687
NC_010120:1065833:107350410735041073923420Neisseria meningitidis 053442, complete genomeputative ATP-binding protein9e-1478.2