Pre_GI: BLASTP Hits

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Query: NC_006511:792543:792543 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 792543, End: 793547, Length: 1005

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:792489:7924897924897934931005Salmonella enterica subsp. enterica serovar Paratyphi A strhydrolase3e-164577
NC_012125:1632150:1632150163215016331541005Salmonella enterica subsp. enterica serovar Paratyphi C strainglycohydrolase1e-163576
NC_006905:2235607:2260057226005722610611005Salmonella enterica subsp. enterica serovar Choleraesuis strputative glycohydrolase1e-163576
NC_011149:2179592:2203129220312922041331005Salmonella enterica subsp. enterica serovar Agona str. SL483,ADP-ribosylglycohydrolase family protein3e-163574
NC_004631:799810:7998107998108008141005Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative hydrolase2e-163574
NC_003198:2179688:2203122220312222041261005Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative hydrolase2e-163574
NC_016832:799764:7997647997648007681005Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-163574
NC_009792:642881:6589726589726599761005Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-142504
NC_010468:1694729:1713898171389817149021005Escherichia coli ATCC 8739, complete genomeADP-ribosylation/Crystallin J17e-140496
NC_016822:2341127:2341127234112723421311005Shigella sonnei 53G, complete genomeputative hydrolase9e-140496
NC_012759:2069326:2070600207060020716041005Escherichia coli BW2952 chromosome, complete genomeputative hydrolase9e-140496
NC_007384:2251792:2251792225179222527961005Shigella sonnei Ss046, complete genomehypothetical protein9e-140496
NC_010473:2267851:2269125226912522701291005Escherichia coli str. K-12 substr. DH10B, complete genomepredicted hydrolase9e-140496
CP002185:2347413:2348687234868723496911005Escherichia coli W, complete genomepredicted hydrolase3e-139494
NC_011741:2239637:2239637223963722406411005Escherichia coli IAI1 chromosome, complete genomeputative (phospho)hydrolase9e-139493
CU928160:2239637:2239637223963722406411005Escherichia coli IAI1 chromosome, complete genomeputative (phospho)hydrolase9e-139493
NC_011750:955451:9751829751829761861005Escherichia coli IAI39 chromosome, complete genomeputative (phospho)hydrolase2e-138492
NC_002695:2854629:2853628285362828546321005Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-138491
NC_011745:2399313:2399313239931324003171005Escherichia coli ED1a chromosome, complete genomeputative (phospho)hydrolase2e-138491
NC_015968:3053565:3067567306756730685711005Enterobacter asburiae LF7a chromosome, complete genomeADP-ribosylation/Crystallin J13e-128458
NC_014121:3483976:3486555348655534875591005Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative (phospho)hydrolase1e-124446
NC_017328:2225418:222670722267072227513807Shigella flexneri 2002017 chromosome, complete genomeADP-ribosylglycohydrolase family protein6e-101367
NC_020211:2206500:2223078222307822240971020Serratia marcescens WW4, complete genomeputative hydrolase1e-100366
NC_009513:169146:1908671908671919521086Lactobacillus reuteri F275, complete genomeADP-ribosylation/Crystallin J15e-42171
NC_015389:1375315:1379397137939713804071011Coriobacterium glomerans PW2 chromosome, complete genomeADP-ribosylation/Crystallin J11e-24114
NC_000909:1123161:112712111271211128026906Methanocaldococcus jannaschii DSM 2661, complete genomedinitrogenase reductase activating glycohydrolase (draG)8e-1478.2
NC_013887:812091:816065816065816970906Methanocaldococcus sp. FS406-22 chromosome, complete genomeADP-ribosylation/Crystallin J12e-1273.6