Pre_GI: BLASTP Hits

Some Help

Query: NC_006511:4119332:4119980 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 4119980, End: 4120339, Length: 360

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:3586000:360461236046123604971360Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-64241
NC_010468:4455201:446994444699444470303360Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF14221e-58224
NC_010473:4256000:425949142594914259850360Escherichia coli str. K-12 substr. DH10B, complete genomeconserved inner membrane protein1e-58224
NC_000913:4159090:415979441597944160153360Escherichia coli K12, complete genomeconserved inner membrane protein1e-58224
CU928160:4248621:425100242510024251361360Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative inner membrane protein1e-58224
NC_009648:4656187:465843546584354658794360Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-55214
NC_005810:3493607:349587334958733496280408Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-41167