Pre_GI: BLASTP Hits

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Query: NC_006155:1916426:1916227 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 1916227, End: 1916436, Length: 210

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009381:1362471:139824413982441398453210Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-33140
NC_004088:2640440:267884326788432679052210Yersinia pestis KIM, complete genomehypothetical protein3e-33140
NC_010634:1916000:191621119162111916420210Yersinia pseudotuberculosis PB1/+, complete genomeTraR/DksA family transcriptional regulator3e-33140
NC_008150:1420825:142082514208251421034210Yersinia pestis Antiqua, complete genomehypothetical protein3e-33140
NC_005810:1794490:179449017944901794699210Yersinia pestis biovar Microtus str. 91001, complete genomeDnaK suppressor protein3e-33140
NC_004547:1873390:188021818802181880427210Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative conjugal transfer protein3e-23107
NC_013421:1819036:184086718408671841076210Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, TraR/DksA family2e-22104
NC_017047:2079368:208374820837482083957210Rahnella aquatilis HX2 chromosome, complete genomephage/conjugal plasmid C-4 type zinc finger protein, TraR family2e-22104
NC_012912:1701231:171445317144531714662210Dickeya zeae Ech1591, complete genometranscriptional regulator, TraR/DksA family3e-22103
NC_013592:2968500:299453229945322994735204Dickeya dadantii Ech586, complete genometranscriptional regulator, TraR/DksA family1e-21101
NC_016818:1795576:183433418343341834543210Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completephage/conjugal plasmid C-4 type zinc finger protein, TraR family4e-2199.8
NC_011283:1811000:185230418523041852513210Klebsiella pneumoniae 342 chromosome, complete genomephage/conjugal plasmid C-4 type zinc finger protein, TraR family2e-2097.8