Pre_GI: BLASTP Hits

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Query: NC_005363:3562205:3565321 Bdellovibrio bacteriovorus HD100, complete genome

Start: 3565321, End: 3566010, Length: 690

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008095:7563441:757578375757837576676894Myxococcus xanthus DK 1622, complete genomehypothetical protein3e-36151
NC_017171:1331794:135273113527311353453723Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomePirin-like protein2e-23109
NC_015379:4426827:442976944297694430491723Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein4e-23108
NC_010995:4297361:431623643162364316928693Cellvibrio japonicus Ueda107, complete genomeProtein yhhW5e-22104
NC_014393:3979350:398015739801573980858702Clostridium cellulovorans 743B chromosome, complete genomePirin domain-containing protein6e-22104
NC_000911:1191445:121545312154531216151699Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-21103
NC_017039:1192111:121452512145251215223699Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-21103
NC_017052:1192099:121451312145131215211699Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-21103
NC_017277:1192485:121427012142701214968699Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-21103
NC_014623:9492000:949819394981939498888696Stigmatella aurantiaca DW4/3-1 chromosome, complete genomepirin family protein3e-21102
NC_009654:3980289:398932139893213990019699Marinomonas sp. MWYL1, complete genomepirin domain-containing protein4e-21101
NC_007778:5079500:509271250927125093410699Rhodopseudomonas palustris HaA2, complete genomePirin-like protein2e-2099
NC_015593:2553500:258516925851692585861693Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completePirin domain-containing protein4e-2098.2
NC_020418:448687:471994471994472692699Morganella morganii subsp. morganii KT, complete genomeQercetin 2,3-dioxygenase2e-1996.3
NC_018012:3300000:331807533180753318794720Thiocystis violascens DSM 198 chromosome, complete genomePirin-like protein2e-1995.9
NC_017030:6558624:656437165643716565066696Corallococcus coralloides DSM 2259 chromosome, complete genomepirin family protein1e-1893.2
NC_012912:242709:245863245863246561699Dickeya zeae Ech1591, complete genomePirin domain protein6e-1787.8
NC_015160:1697125:171324517132451713952708Odoribacter splanchnicus DSM 20712 chromosome, complete genomePirin domain-containing protein4e-1581.6
NC_012968:435532:435532435532436233702Methylotenera mobilis JLW8, complete genomePirin domain protein3e-1478.6
NC_014622:5315500:533985353398535340566714Paenibacillus polymyxa SC2 chromosome, complete genomepirin4e-1375.1
NC_014483:4957315:498161849816184982331714Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein5e-1374.7
NC_010505:4990472:499515249951524995898747Methylobacterium radiotolerans JCM 2831, complete genomePirin domain protein6e-1374.3
NC_015638:2588954:259170625917062592422717Lacinutrix sp. 5H-3-7-4 chromosome, complete genomePirin domain-containing protein7e-1374.3
NC_009338:686932:713909713909714676768Mycobacterium gilvum PYR-GCK chromosome, complete genomepirin domain-containing protein3e-1272.4
NC_014814:132404:133713133713134480768Mycobacterium sp. Spyr1 chromosome, complete genomePirin-related protein3e-1272.4
NC_008543:61000:645956459565302708Burkholderia cenocepacia HI2424 chromosome 2, complete sequencePirin domain protein domain protein3e-1168.6
NC_008061:2193000:220301522030152203722708Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencePirin-like3e-1168.6
NC_015846:531984:531984531984532793810Capnocytophaga canimorsus Cc5 chromosome, complete genomeprotein yhhW4e-1168.2
NC_015312:2278566:228135722813572282124768Pseudonocardia dioxanivorans CB1190 chromosome, complete genomePirin domain-containing protein6e-1167.8
NC_016582:1707756:172193717219371722707771Streptomyces bingchenggensis BCW-1 chromosome, complete genomepirin domain-containing protein2e-1066.2
NC_012947:630757:652486652486653187702Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completepirin5e-1064.7
NC_017047:4379989:438383143838314384535705Rahnella aquatilis HX2 chromosome, complete genomeputative pirin-related protein1e-0963.2
NC_019962:1676632:169722016972201698188969Natrinema pellirubrum DSM 15624, complete genomePirin-related protein1e-0963.2
NC_015061:4286000:428994542899454290649705Rahnella sp. Y9602 chromosome, complete genomePirin domain protein2e-0962.8
NC_020260:3457597:347962734796273480328702Cronobacter sakazakii Sp291, complete genomepirin3e-0962
NC_013791:1507943:152342315234231524394972Bacillus pseudofirmus OF4 chromosome, complete genomepirin-like protein1e-0756.6
NC_013205:2922343:293955829395582940310753Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Pirin domain protein3e-0755.5
NC_017167:3013947:303080530308053031557753Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1Pirin domain-containing protein3e-0755.5
NC_015379:4630367:464628046462804647125846Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative pirin protein3e-0755.1
NC_011071:2207385:220987222098722210744873Stenotrophomonas maltophilia R551-3, complete genomePirin domain protein2e-0653.1
NC_005810:4306716:432601143260114326715705Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-0653.1