Pre_GI: BLASTP Hits

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Query: NC_005363:2172444:2174727 Bdellovibrio bacteriovorus HD100, complete genome

Start: 2174727, End: 2175083, Length: 357

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016633:541559:543800543800544033234Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeputative RNA-binding protein (contains KH domain)9e-0855.5
NC_012225:2333500:235343023534302353672243Brachyspira hyodysenteriae WA1, complete genomeR-binding protein (contains KH domain)5e-0753.1
NC_007759:2179000:219638821963882196633246Syntrophus aciditrophicus SB, complete genomeRNA-binding protein2e-0651.2
NC_009698:2420484:242406424240642424291228Clostridium botulinum A str. Hall chromosome, complete genomehypothetical protein3e-0650.8
NC_009495:2571732:257969725796972579924228Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein3e-0650.8
NC_010516:2567911:256791125679112568138228Clostridium botulinum B1 str. Okra, complete genomehypothetical protein3e-0650.8
NC_010520:2635750:264271526427152642942228Clostridium botulinum A3 str. Loch Maree, complete genomehypothetical protein3e-0650.8