Pre_GI: BLASTP Hits

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Query: NC_005296:2860000:2883903 Rhodopseudomonas palustris CGA009, complete genome

Start: 2883903, End: 2884922, Length: 1020

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008209:1385094:140281914028191403808990Roseobacter denitrificans OCh 114, complete genomeC4-dicarboxylate transport system C4-dicarboxylate-binding protein, putative2e-44179
NC_007969:1076287:1077587107758710786391053Psychrobacter cryohalolentis K5, complete genomeTRAP dicarboxylate transporter- DctP subunit3e-1996.3
NC_015573:813000:8433328433328443841053Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomefamily 7 extracellular solute-binding protein5e-1789
NC_016593:762216:7896097896097906491041Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeTRAP dicarboxylate transporter subunit DctP1e-1687.4
NC_020210:661236:671267671267672223957Geobacillus sp. GHH01, complete genome2,3-diketo-L-gulonate-binding periplasmic protein4e-1479.3
NC_016048:3856665:3866163386616338672241062Oscillibacter valericigenes Sjm18-20, complete genomeputative transporter7e-1478.2
NC_006510:1995916:2015861201586120168891029Geobacillus kaustophilus HTA426, complete genomeC4-dicarboxylate transport system (C4-dicarboxylate-binding protein)1e-1377.8
NC_014206:1618988:1621954162195416230121059Geobacillus sp. C56-T3 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP1e-1377.4
NC_007509:1043602:104900310490031049989987Burkholderia sp. 383 chromosome 3, complete sequenceTRAP dicarboxylate transporter- DctP subunit8e-1374.7
NC_015565:1511426:1528392152839215294141023Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeTRAP dicarboxylate transporter subunit DctP8e-1374.7
NC_009778:4188000:422889942288994229882984Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-1272.8
NC_008392:666000:683207683207684193987Burkholderia cepacia AMMD chromosome 3, complete sequenceTRAP dicarboxylate transporter, DctP subunit3e-1272.8
NC_019978:2532640:2546495254649525475501056Halobacteroides halobius DSM 5150, complete genometripartite ATP-independent periplasmic transporter solute receptor, DctP family1e-1170.9
NC_017187:325229:340255340255341247993Arcobacter butzleri ED-1, complete genomeC4-dicarboxylate-binding periplasmic protein2e-1170.5
NC_007963:2777066:2785741278574127867511011Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter, DctP subunit2e-1169.7
NC_011830:4951716:4951716495171649527471032Desulfitobacterium hafniense DCB-2, complete genomeTRAP dicarboxylate transporter, DctP subunit3e-1169.7
NC_014532:2268078:2268078226807822692171140Halomonas elongata DSM 2581, complete genomeTRAP transporter substrate-binding protein4e-1168.9
NC_007503:1111457:1159123115912311601901068Carboxydothermus hydrogenoformans Z-2901, complete genomeTRAP dicarboxylate transporter, DctP subunit6e-1168.6
NC_015684:3157941:317810531781053179091987Oligotropha carboxidovorans OM5 chromosome, complete genomeTRAP transport system, substrate-binding protein9e-1168.2
NC_014966:1668822:169116016911601692143984Vibrio vulnificus MO6-24/O chromosome II, complete sequenceTRAP-type C4-dicarboxylate transporter periplasmic protein9e-1168.2
NC_007963:1190847:121161812116181212556939Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter, DctP subunit9e-1168.2
NC_011892:352652:365576365576366562987Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeTRAP dicarboxylate transporter, DctP subunit2e-1067
NC_014011:1354261:1371285137128513723221038Aminobacterium colombiense DSM 12261 chromosome, complete genomeExtracellular solute-binding protein, family 72e-1067
NC_006155:1916426:195311219531121954104993Yersinia pseudotuberculosis IP 32953, complete genomeTRAP-T family C4-dicarboxylate transporter, periplasmic binding protein (DctP subunit)6e-1065.1
NC_010634:1916000:195309619530961954088993Yersinia pseudotuberculosis PB1/+, complete genomeTRAP dicarboxylate transporter, DctP subunit6e-1065.1
NC_014206:1618988:1618988161898816200161029Geobacillus sp. C56-T3 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP8e-1064.7
NC_020911:18500:362213622137201981Octadecabacter antarcticus 307, complete genomeTRAP transporter periplasmatic solute-binding protein DctP1e-0964.7
NC_016629:3789554:3828241382824138292871047Desulfovibrio africanus str. Walvis Bay chromosome, completeextracellular solute-binding protein1e-0964.3
NC_008043:86470:1051911051911062371047Silicibacter sp. TM1040 mega plasmid, complete sequenceTRAP dicarboxylate transporter- DctP subunit2e-0963.5
NC_015224:1914833:192134819213481922325978Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative C4-dicarboxylate transporter,periplasmic protein2e-0963.5
NC_011894:3161289:3178584317858431796031020Methylobacterium nodulans ORS 2060, complete genomeTRAP dicarboxylate transporter, DctP subunit2e-0963.5
NC_016513:1761830:176842317684231769415993Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDctP protein3e-0962.8
NC_013740:2218215:2228533222853322295461014Acidaminococcus fermentans DSM 20731, complete genomeTRAP dicarboxylate transporter, DctP subunit3e-0962.8
NC_007644:416000:4256164256164266231008Moorella thermoacetica ATCC 39073, complete genomeTRAP dicarboxylate transporter, DctP subunit3e-0962.8
NC_010552:2454776:2473745247374524747761032Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceTRAP dicarboxylate transporter, DctP subunit5e-0962.4
NC_016943:4194002:4236501423650142375921092Blastococcus saxobsidens DD2, complete genomeTRAP dicarboxylate transporter subunit DctP5e-0962.4
NC_009439:4404942:4427124442712444281251002Pseudomonas mendocina ymp, complete genomeTRAP dicarboxylate transporter, DctP subunit6e-0962
NC_007963:317291:3172913172913183551065Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctP subunit6e-0962
NC_009457:1444449:148209614820961483061966Vibrio cholerae O395 chromosome 2, complete sequenceC4-dicarboxylate-binding periplasmic protein8e-0961.6
NC_012578:1838470:187612618761261877091966Vibrio cholerae M66-2 chromosome I, complete sequenceC4-dicarboxylate-binding periplasmic protein8e-0961.6
NC_012582:2013515:201351520135152014480966Vibrio cholerae O395 chromosome chromosome I, complete sequenceC4-dicarboxylate-binding periplasmic protein8e-0961.6
NC_012668:1688500:171755017175501718515966Vibrio cholerae MJ-1236 chromosome 1, complete sequenceTRAP-type transport system periplasmic component8e-0961.6
NC_016445:1363831:140039314003931401358966Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeC4-dicarboxylate-binding periplasmic protein8e-0961.6
NC_015519:1888917:1890773189077318917981026Tepidanaerobacter sp. Re1 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP7e-0961.6
NC_017270:1755552:176774417677441768709966Vibrio cholerae LMA3984-4 chromosome chromosome I, completeTRAP-type transport system, periplasmic protein1e-0861.2
NC_020911:3046916:306024730602473061245999Octadecabacter antarcticus 307, complete genomeTRAP transporter periplasmatic solute-binding protein DctP1e-0860.8
NC_009050:604950:627975627975628964990Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceTRAP dicarboxylate transporter, DctP subunit3e-0859.7
NC_007645:3688000:3688251368825136892671017Hahella chejuensis KCTC 2396, complete genomeTRAP-type mannitol/chloroaromatic compound transport system, periplasmic component3e-0859.7
NC_018581:759932:7701847701847713741191Gordonia sp. KTR9 chromosome, complete genomeTRAP-type C4-dicarboxylate transport system, periplasmic component4e-0859.3
NC_009997:3483157:3500296350029635013151020Shewanella baltica OS195, complete genomeTRAP dicarboxylate transporter, DctP subunit5e-0858.9
NC_016901:3430401:3447508344750834485271020Shewanella baltica OS678 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP5e-0858.9
NC_012491:1293086:1294546129454612955951050Brevibacillus brevis NBRC 100599, complete genomeprobable C4-dicarboxylate ABC transporter substrate binding protein5e-0858.9
NC_006582:4256915:425691542569154257904990Bacillus clausii KSM-K16, complete genomeC4-dicarboxylate transport system substrate-binding protein1e-0757.8
NC_009654:304000:3190013190013200141014Marinomonas sp. MWYL1, complete genomeTRAP dicarboxylate transporter- DctP subunit1e-0757.8
NC_016641:2815974:2835933283593328369671035Paenibacillus terrae HPL-003 chromosome, complete genomeputative C4-dicarboxylate ABC transporter substrate binding protein2e-0757
NC_014532:2989185:300087330008733001859987Halomonas elongata DSM 2581, complete genomeTRAP transporter substrate-binding protein3e-0756.2
NC_009832:110239:1319071319071329201014Serratia proteamaculans 568, complete genomeTRAP dicarboxylate transporter, DctP subunit4e-0755.8
NC_007778:3784104:380823938082393809237999Rhodopseudomonas palustris HaA2, complete genomeTRAP dicarboxylate transporter DctP subunit5e-0755.5
NC_011992:1968258:1995100199510019961101011Acidovorax ebreus TPSY, complete genomeTRAP dicarboxylate transporter, DctP subunit5e-0755.5
NC_013855:558831:5737265737265747661041Azospirillum sp. B510 plasmid pAB510a, complete sequenceTRAP dicarboxylate transporter5e-0755.5
NC_016943:4194002:4201214420121442022901077Blastococcus saxobsidens DD2, complete genomeTRAP-type C4-dicarboxylate transport system, Extracellular solute-binding protein7e-0755.1
NC_017249:7917586:7936988793698879380131026Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein7e-0755.1
NC_004463:2344128:2344128234412823451951068Bradyrhizobium japonicum USDA 110, complete genomeprobable ABC transporter substrate-binding protein8e-0755.1
NC_014041:3197192:320316532031653204151987Zunongwangia profunda SM-A87 chromosome, complete genomeputative dicarboxylate-binding periplasmic protein8e-0755.1
NC_016048:308342:3402363402363412941059Oscillibacter valericigenes Sjm18-20, complete genomeputative transporter1e-0654.3
NC_015589:2447132:2452948245294824539821035Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeTRAP dicarboxylate transporter DctP subunit1e-0654.3
NC_009454:1389974:1396060139606013970881029Pelotomaculum thermopropionicum SI, complete genomeTRAP-type C4-dicarboxylate transport system, periplasmic component5e-0652.4