Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1877736 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1877736, End: 1878032, Length: 297

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012583:335000:349302349302349637336Vibrio cholerae O395 chromosome chromosome II, complete sequencePlasmid stabilization system protein1e-37154
NC_016446:49618:904189041890735318Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeplasmid stabilization system protein1e-37154
NC_012667:931390:996052996052996369318Vibrio cholerae MJ-1236 chromosome 2, complete genomeParE toxin protein1e-37154
NC_002506:324552:349629349629349928300Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeplasmid stabilization element ParE, putative6e-0753.1
NC_009456:787322:894451894451894750300Vibrio cholerae O395 chromosome 1, complete sequenceputative plasmid stabilization element ParE6e-0753.1
NC_012580:301500:321980321980322279300Vibrio cholerae M66-2 chromosome II, complete sequenceplasmid stabilization element ParE6e-0753.1
NC_012583:361241:369192369192369491300Vibrio cholerae O395 chromosome chromosome II, complete sequenceplasmid stabilization element ParE, putative6e-0753.1
NC_012667:931390:101179310117931012092300Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein6e-0753.1
NC_016446:49618:746957469574994300Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein6e-0753.1
NC_016945:324519:349446349446349745300Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein6e-0753.1
NC_017269:303500:303540303540303839300Vibrio cholerae LMA3984-4 chromosome II, complete sequencePlasmid stabilization element ParE, putative6e-0753.1
NC_008345:4107847:413217241321724132483312Shewanella frigidimarina NCIMB 400, complete genomeplasmid stabilization system2e-0651.2
NC_009438:212476:212476212476212787312Shewanella putrefaciens CN-32 chromosome, complete genomeplasmid stabilization system protein2e-0650.8