Pre_GI: BLASTP Hits

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Query: NC_004668:546142:570062 Enterococcus faecalis V583, complete genome

Start: 570062, End: 570595, Length: 534

Host Lineage: Enterococcus faecalis; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is one of the first vancomycin-resistant strains isolated. This isolate came from a blood culture derived from a chronically-infected patient in 1987 from Barnes Hospital in St. Louis, Missouri, USA. This strain was found to lack the cytolysin gene and a surface adhesin, Esp, that contributes to urinary tract infections. Mobile genetic elements make up one quarter of the genome. This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen can cause urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart), similar to infections caused by Enterococcus faecium. Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains. Enterococcus faecalis produces a cytolysin toxin that is encoded on various mobile genetic elements, pathogenicity islands, and conjugative plasmids. The cytolysin aids in pathogenesis, possibly by causing destruction of cells such as erythrocytes, which allows access to new nutrients for the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014624:1675500:173395517339551734491537Eubacterium limosum KIST612 chromosome, complete genomeimmunoglobulin-binding regulator B5e-47186
NC_014933:3015678:303458330345833035119537Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator1e-43175
NC_016776:2411154:244351324435132444025513Bacteroides fragilis 638R, complete genomehypothetical protein2e-41168
NC_004663:2859158:288469928846992885211513Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein2e-41168
NC_016776:5174606:524234452423445242865522Bacteroides fragilis 638R, complete genomehypothetical protein2e-41168
NC_009614:4565620:457340945734094573930522Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator2e-41168
NC_010170:1417615:142397114239711424603633Bordetella petrii, complete genomehypothetical protein7e-38156
NC_012779:2856051:287655228765522877181630Edwardsiella ictaluri 93-146, complete genomeIbrB5e-37153
NC_003198:4453457:446065244606524461266615Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-34145
NC_012125:4536383:454357745435774544191615Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-34145
NC_016832:4425330:443249844324984433139642Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-34145
NC_008253:2056734:207731920773192077963645Escherichia coli 536, complete genomehypothetical protein7e-34143
NC_007946:2155454:217600721760072176651645Escherichia coli UTI89, complete genomehypothetical protein YbdM7e-34143
NC_004431:2304280:232484223248422325486645Escherichia coli CFT073, complete genomeHypothetical protein ybdM7e-34143
NC_002655:1103991:112718511271851127823639Escherichia coli O157:H7 EDL933, complete genomehypothetical protein3e-33141
NC_010498:1117938:114637011463701147014645Escherichia coli SMS-3-5, complete genome4e-33140
CP002797:2062006:207094420709442071438495Escherichia coli NA114, complete genomehypothetical protein3e-33140
NC_011750:1094000:111078111107811111275495Escherichia coli IAI39 chromosome, complete genome3e-33140
CU928145:3360967:339306533930653393709645Escherichia coli 55989 chromosome, complete genometranscriptional regulator IbrB1e-32138
NC_011748:3360967:339306533930653393709645Escherichia coli 55989, complete genometranscriptional regulator IbrB1e-32138
NC_015567:1206727:122435612243561224973618Serratia sp. AS9 chromosome, complete genomeParB domain-containing protein nuclease3e-31134
NC_015566:1206500:122417112241711224788618Serratia sp. AS12 chromosome, complete genomeParB domain-containing protein nuclease3e-31134
NC_012779:2856051:286924828692482869880633Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-25114
NC_004431:4955658:496228449622844962847564Escherichia coli CFT073, complete genomeHypothetical protein ybdM4e-24110
NC_008563:3332114:333743633374363337999564Escherichia coli APEC O1, complete genomehypothetical protein4e-24110
NC_011742:3245500:325222032522203252783564Escherichia coli S88 chromosome, complete genome4e-24110
NC_014618:4114004:414571541457154146173459Enterobacter cloacae SCF1 chromosome, complete genomeimmunoglobulin-binding regulator9e-1166.2
NC_018870:2316499:2354383235438323556361254Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase2e-0652
NC_009012:1934107:1964406196440619656591254Clostridium thermocellum ATCC 27405, complete genomeParB-like nuclease4e-0650.8
NC_016627:4323370:4352807435280743540601254Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase4e-0650.8
NC_015520:2974048:2990245299024529914981254Mahella australiensis 50-1 BON chromosome, complete genomeParB domain-containing protein nuclease5e-0650.8