Pre_GI: BLASTP Hits

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Query: NC_004631:2205821:2214118 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2214118, End: 2214951, Length: 834

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:751779:766138766138766971834Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-139494
NC_011147:2085241:209401120940112094844834Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-138491
NC_006511:2090058:209882820988282099661834Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-138491
NC_016863:776734:791381791381792214834Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative glycosyltransferase2e-138491
NC_016860:816000:829715829715830548834Salmonella enterica subsp. enterica serovar Typhimurium strputative glycosyl transferase2e-138491
NC_016857:775649:790296790296791129834Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative glycosyltransferase2e-138491
NC_016810:775649:790296790296791129834Salmonella enterica subsp. enterica serovar Typhimurium strputative glycosyltransferase, cell wall biogenesis2e-138491
NC_003197:776238:790885790885791718834Salmonella typhimurium LT2, complete genomeputative glycosyltransferase2e-138491
NC_016856:776735:791382791382792215834Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative glycosyltransferase8e-138489
NC_011080:780850:795553795553796329777Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein5e-127453
NC_017046:775636:790339790339791115777Salmonella enterica subsp. enterica serovar Typhimurium str. 798glycosyltransferase, cell wall biogenesis2e-126451
NC_016832:2201860:221089022108902211657768Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-125447
NC_010102:2322866:233236923323692333136768Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-123442
NC_011083:824659:839360839360840127768Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative glycosyltransferase1e-123442
NC_011094:842038:856742856742857467726Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-112405
NC_009831:3612206:364098736409873641877891Shewanella sediminis HAW-EB3, complete genomeglycosyl transferase, family 29e-1064.3