Pre_GI: BLASTP Hits

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Query: NC_004603:1961432:1982641 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1982641, End: 1983885, Length: 1245

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:2258854:2291067229106722922661200Vibrio cholerae MJ-1236 chromosome 1, complete sequencearomatic amino acid aminotransferase0709
NC_009092:2282437:2310338231033823115311194Shewanella loihica PV-4, complete genomeAspartate transaminase5e-154544
NC_014121:2745097:2765753276575327669431191Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completearomatic amino acid aminotransferase7e-152537
NC_014500:2934232:2947249294724929484391191Dickeya dadantii 3937 chromosome, complete genomeaspartate transaminase4e-149528
NC_013416:1246880:1268799126879912699891191Aggregatibacter actinomycetemcomitans D11S-1, complete genomeaspartate aminotransferase (transaminase a) (aspat)1e-146519
NC_016513:1568401:1590656159065615918461191Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completearomatic amino acid aminotransferase1e-146519
NC_006138:656000:6746896746896758851197Desulfotalea psychrophila LSv54, complete genomeaspartate aminotransferase8e-122437
NC_009138:2242470:2245561224556122467751215Herminiimonas arsenicoxydans, complete genometyrosine aminotransferase, tyrosine-repressible, PLP-dependent2e-111402
NC_015856:3675592:3681478368147836827221245Collimonas fungivorans Ter331 chromosome, complete genomeAromatic-amino-acid aminotransferase5e-110398
NC_009656:1994392:2029359202935920305551197Pseudomonas aeruginosa PA7 chromosome, complete genomearomatic amino acid aminotransferase9e-110397
NC_002516:3519000:3522748352274835239441197Pseudomonas aeruginosa PAO1, complete genomeprobable amino acid aminotransferase9e-109394
NC_011071:10842:2539825398266001203Stenotrophomonas maltophilia R551-3, complete genomeAspartate transaminase2e-108392
NC_016893:694587:7007337007337019231191Wigglesworthia glossinidia endosymbiont of Glossina morsitansaspartate transaminase7e-108390
NC_004344:129798:1417301417301429261197Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,aspartate aminotransferase3e-106385
NC_015224:4101939:4101939410193941031321194Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,aromatic amino acid aminotransferase3e-101369
NC_016856:4482845:4482845448284544840381194Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Saromatic amino acid aminotransferase6e-101367
NC_013421:4006085:4012184401218440133771194Pectobacterium wasabiae WPP163, complete genomeAromatic-amino-acid transaminase8e-101367
NC_020181:3585898:3619303361930336204961194Enterobacter aerogenes EA1509E, complete genomeBiosynthetic Aromatic amino acid aminotransferase alpha1e-100367
NC_013364:4990365:5006899500689950080921194Escherichia coli O111:H- str. 11128, complete genometyrosine aminotransferase TyrB, tyrosine-repressible3e-99362
NC_010067:3310336:3358385335838533595781194Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-99361
NC_013961:3413011:3413011341301134142041194Erwinia amylovora, complete genomearomatic-amino-acid transaminase3e-97355
NC_013971:335247:3571783571783583711194Erwinia amylovora ATCC 49946 chromosome, complete genomearomatic-amino-acid aminotransferase3e-97355
NC_012997:3185248:3210340321034032115151176Teredinibacter turnerae T7901, complete genomeaminotransferase, classes I and II7e-96351
NC_009524:263587:2647202647202659161197Psychrobacter sp. PRwf-1 chromosome, complete genomearomatic amino acid aminotransferase3e-94345
NC_005140:960261:9777979777979789931197Vibrio vulnificus YJ016 chromosome II, complete sequenceaspartate aminotransferase2e-92339
NC_010676:2793237:2813224281322428144141191Burkholderia phytofirmans PsJN chromosome 2, complete sequenceAspartate transaminase1e-89330
NC_014034:3570034:3584733358473335859141182Rhodobacter capsulatus SB1003 chromosome, complete genomearomatic-amino-acid aminotransferase1e-84313
NC_020164:887510:9047859047859060711287Staphylococcus warneri SG1, complete genomehypothetical protein4e-0756.6