Pre_GI: BLASTP Hits

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Query: NC_004578:895019:898785 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 898785, End: 898860, Length: 76

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:3684099:37064473706447370652276Pseudomonas syringae pv. syringae B728a, complete genometRNA-Asn8e-0752.4
NC_005773:866157:87087687087687095176Pseudomonas syringae pv. phaseolicola 1448A, complete genometRNA-Asn8e-0752.4
NC_007005:830467:83518583518583526076Pseudomonas syringae pv. syringae B728a, complete genometRNA-Asn8e-0752.4
NC_012660:4734363:47459214745921474599373Pseudomonas fluorescens SBW25 chromosome, complete genometRNA-Asn4e-0650.1
NC_015556:4074367:40991654099165409924076Pseudomonas fulva 12-X chromosome, complete genometRNA-Asn9e-0648.9
NC_009439:860571:86312386312386319876Pseudomonas mendocina ymp, complete genometRNA-Asn9e-0648.9
NC_008027:4953432:49763214976321497639676Pseudomonas entomophila L48, complete genometRNA-Asn9e-0648.9