Pre_GI: BLASTP Hits

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Query: NC_004578:2185907:2192645 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 2192645, End: 2194264, Length: 1620

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:3851433:3860621386062138625011881Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein0823
NC_007005:4062311:4071519407151940733481830Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein3e-73276
NC_005773:3851433:3862553386255338641451593Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein2e-40167
NC_004578:2185907:2189494218949421913501857Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-39163
NC_004578:2185907:219939821993982200060663Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein7e-1169.3
NC_015733:1680500:1689401168940116913561956Pseudomonas putida S16 chromosome, complete genomehypothetical protein1e-1068.2
NC_009512:4287605:4292924429292442949332010Pseudomonas putida F1, complete genomehypothetical protein2e-0861.2
NC_007492:3332839:3340998334099833429951998Pseudomonas fluorescens PfO-1, complete genomehypothetical protein6e-0756.2
NC_017986:1042642:1050971105097110530252055Pseudomonas putida ND6 chromosome, complete genomehypothetical protein6e-0756.2
NC_010322:1623599:1643342164334216451201779Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein2e-0654.3