Pre_GI: BLASTP Hits

Some Help

Query: NC_004578:212468:239026 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 239026, End: 239304, Length: 279

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013889:216829:231066231066231344279Thioalkalivibrio sp. K90mix chromosome, complete genomeplasmid maintenance system killer2e-30130
NC_019902:498500:498505498505498783279Thioalkalivibrio nitratireducens DSM 14787, complete genomeHigB toxin protein1e-29128
NC_016830:952342:980757980757981017261Pseudomonas fluorescens F113 chromosome, complete genomeprotein HigB8e-27119
NC_008740:3520500:354343335434333543711279Marinobacter aquaeolei VT8, complete genomeplasmid maintenance system killer3e-26116
NC_017506:4380196:440037144003714400655285Marinobacter adhaerens HP15 chromosome, complete genomeplasmid maintenance system killer protein4e-26116
NC_002937:1764117:180094618009461801224279Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completekiller protein, putative7e-26115
NC_011769:2016000:204154220415422041820279Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeplasmid maintenance system killer8e-25112
NC_012969:2476318:250110225011022501383282Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeplasmid maintenance system killer8e-25112
NC_009943:1637582:164753416475341647812279Candidatus Desulfococcus oleovorans Hxd3, complete genomeplasmid maintenance system killer4e-24109
NC_016629:3789554:382613638261363826417282Desulfovibrio africanus str. Walvis Bay chromosome, completeplasmid maintenance system killer protein1e-22105
NC_011666:2259447:228026822802682280549282Methylocella silvestris BL2, complete genomeplasmid maintenance system killer1e-22105
NC_015563:3511951:351509535150953515373279Delftia sp. Cs1-4 chromosome, complete genomeplasmid maintenance system killer2e-22104
NC_011901:39215:439304393044208279Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeplasmid maintenance system killer1e-22104
NC_008536:2961460:297490329749032975181279Solibacter usitatus Ellin6076, complete genomeplasmid maintenance system killer1e-21101
NC_007626:697926:712798712798713076279Magnetospirillum magneticum AMB-1, complete genomePlasmid maintenance system killer protein1e-21101
NC_013174:815155:828193828193828474282Jonesia denitrificans DSM 20603, complete genomeplasmid maintenance system killer1e-21101
NC_007517:3344799:336000033600003360278279Geobacter metallireducens GS-15, complete genomePlasmid maintenance system killer4e-2199.8
NC_009937:958576:973875973875974156282Azorhizobium caulinodans ORS 571, complete genomeplasmid maintenance system killer protein5e-2096.3
NC_014394:1594071:160225516022551602533279Gallionella capsiferriformans ES-2 chromosome, complete genomeplasmid maintenance system killer6e-2095.9
NC_008358:2808299:282649528264952826776282Hyphomonas neptunium ATCC 15444, complete genomeplasmid maintenance system killer protein1e-1995.5
NC_015125:3284095:329941832994183299699282Microbacterium testaceum StLB037, complete genomeplasmid maintenance system killer protein1e-1995.1
NC_011979:2969969:299164129916412991922282Geobacter sp. FRC-32, complete genomeplasmid maintenance system killer2e-1994.4
NC_011757:1121262:113512611351261135407282Methylobacterium chloromethanicum CM4, complete genomeplasmid maintenance system killer5e-1992.8
NC_020302:1074120:108211210821121082393282Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein9e-1992
NC_010995:4297361:431695543169554317248294Cellvibrio japonicus Ueda107, complete genomePlasmid maintenance system killer protein2e-1890.9
NC_014221:1518583:153118415311841531477294Truepera radiovictrix DSM 17093 chromosome, complete genomeplasmid maintenance system killer3e-1890.1
NC_011060:2099255:212059521205952120888294Pelodictyon phaeoclathratiforme BU-1, complete genomeplasmid maintenance system killer3e-1787
NC_014973:243000:251228251228251509282Geobacter sp. M18 chromosome, complete genomeplasmid maintenance system killer7e-1785.9
NC_014972:210500:219697219697219978282Desulfobulbus propionicus DSM 2032 chromosome, complete genomeplasmid maintenance system killer5e-1683.2
NC_010842:2310756:233455123345512334832282Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeplasmid maintenance system killer protein6e-1682.8
NC_014973:5099543:510392351039235104204282Geobacter sp. M18 chromosome, complete genomeplasmid maintenance system killer6e-1682.8
NC_015386:125499:127820127820128101282Treponema succinifaciens DSM 2489 plasmid pTRESU01, completeplasmid maintenance system killer8e-1682.4
NC_011146:2200142:220835922083592208640282Geobacter bemidjiensis Bem, complete genomeplasmid maintenance system killer9e-1682
NC_015859:3126500:313624431362443136525282Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein3e-1580.1
NC_004567:343500:383216383216383443228Lactobacillus plantarum WCFS1, complete genomeplantaricin biosynthesis protein PlnX (putative)4e-1580.1
NC_013172:2556517:256611825661182566423306Brachybacterium faecium DSM 4810, complete genome2e-1478.2
NC_008571:938835:101186210118621012143282Gramella forsetii KT0803, complete genomeplasmid maintenance system killer protein1e-1375.5
NC_010602:2244729:231212223121222312403282Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'putative plasmid maintenance system killer protein2e-1374.7
NC_010842:2310756:231750823175082317789282Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeplasmid maintenance system killer protein2e-1374.7
NC_007508:5093365:511576651157665115984219Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein2e-1374.7
NC_010617:774914:785351785351785506156Kocuria rhizophila DC2201, complete genomehypothetical protein3e-1167.4
NC_020156:3670500:367836736783673678543177Nonlabens dokdonensis DSW-6, complete genomeplasmid maintenance system killer2e-1064.7
NC_012108:1067876:107706710770671077366300Desulfobacterium autotrophicum HRM2, complete genomeputative plasmid maintenance system killer protein4e-1063.5
NC_012580:353273:355870355870356223354Vibrio cholerae M66-2 chromosome II, complete sequencekiller protein8e-0958.9
NC_012580:353273:372908372908373261354Vibrio cholerae M66-2 chromosome II, complete sequencekiller protein8e-0958.9
NC_012583:335000:353311353311353664354Vibrio cholerae O395 chromosome chromosome II, complete sequencekiller protein, putative8e-0958.9
NC_012667:931390:992007992007992360354Vibrio cholerae MJ-1236 chromosome 2, complete genomeHigB toxin protein8e-0958.9
NC_016446:49618:944279442794780354Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeproteic killer suppression protein8e-0958.9
NC_009720:251703:277302277302277598297Xanthobacter autotrophicus Py2, complete genomeplasmid maintenance system killer3e-0753.9
NC_011750:1809943:182950618295061829784279Escherichia coli IAI39 chromosome, complete genomeputative plasmid maintenance system killer protein3e-0650.4