Pre_GI: BLASTP Hits

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Query: NC_004547:913553:922585 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 922585, End: 922755, Length: 171

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016818:4215836:423853442385344238710177Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeOgr/Delta-like zinc finger3e-23107
NC_020211:996497:100815510081551008409255Serratia marcescens WW4, complete genomebacteriophage regulatory protein7e-1372.4
NC_009778:567000:598018598018598269252Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-1167
NC_020064:871338:880827880827881060234Serratia marcescens FGI94, complete genomeOgr/Delta-like zinc finger7e-1165.9
NC_011147:4460726:446048444604844460729246Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-1063.9
NC_010102:2862178:286276128627612863006246Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1063.9
NC_006511:4465495:446525344652534465498246Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-1063.9
NC_016810:2871689:289502528950252895267243Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage gene regulatory protein6e-1062.8
NC_011080:2870428:288319228831922883437246Salmonella enterica subsp. enterica serovar Newport str. SL254,phage transcriptional activator, Ogr/delta6e-1062.8
NC_016816:674171:680173680173680394222Pantoea ananatis LMG 5342, complete genometranscriptional activator Ogr/delta2e-0960.8
NC_016845:575123:588240588240588485246Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,phage transcriptional activator, Ogr/delta3e-0960.5
NC_016835:128757:133759133759133980222Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,Ogr/Delta-like zinc finger3e-0960.5
NC_003198:4676536:468932346893234689562240Salmonella enterica subsp. enterica serovar Typhi str. CT18,bacteriophage gene regulatory protein5e-0959.7
NC_004631:4661000:467221246722124672451240Salmonella enterica subsp. enterica serovar Typhi Ty2, completebacteriophage gene regulatory protein5e-0959.7
NC_021066:5342127:536065053606505360895246Raoultella ornithinolytica B6, complete genomephage transcriptional activator, Ogr/delta7e-0959.3
NC_014121:677799:689843689843690061219Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebacteriophage gene regulatory protein2e-0857.8
NC_014837:3739408:375358937535893753807219Pantoea sp. At-9b chromosome, complete genometranscriptional activator Ogr/delta4e-0857
NC_009801:995396:101664810166481016866219Escherichia coli E24377A, complete genomephage transcriptional activator, Ogr/Delta3e-0857
NC_012880:2480000:249015824901582490352195Dickeya dadantii Ech703, complete genometranscriptional activator Ogr/delta4e-0856.6
NC_012917:833721:839975839975840223249Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional activator Ogr/delta5e-0856.6
NC_010468:49074:512145121451456243Escherichia coli ATCC 8739, complete genometranscriptional activator Ogr/delta6e-0856.2
NC_009436:3367194:337924033792403379503264Enterobacter sp. 638, complete genomephage transcriptional activator, Ogr/delta6e-0856.2
NC_004547:442927:473425473425473673249Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative bacteriophage regulatory protein8e-0855.8
NC_004547:3866439:387425338742533874501249Erwinia carotovora subsp. atroseptica SCRI1043, complete genomebacteriophage regulatory protein9e-0855.5
NC_013956:4326388:433082043308204331095276Pantoea ananatis LMG 20103 chromosome, complete genomeB9e-0855.5
NC_011740:810411:824270824270824551282Escherichia fergusonii ATCC 35469, complete genomeputative activator from phage origin ( Ogr family transcription activator)2e-0754.7
NC_006155:2084669:209720720972072097422216Yersinia pseudotuberculosis IP 32953, complete genomeprophage p2 ogr protein2e-0754.7
NC_013508:3593000:361099636109963611235240Edwardsiella tarda EIB202, complete genomebacteriophage gene regulatory protein4e-0753.5
NC_014306:4376012:441318944131894413461273Erwinia billingiae Eb661, complete genomePutative Ogr family phage transcription activator5e-0753.1
NC_014306:4901390:494241749424174942689273Erwinia billingiae Eb661, complete genomephage transcriptional activator, Ogr/Delta9e-0752.4
NC_015968:3301958:332969733296973329969273Enterobacter asburiae LF7a chromosome, complete genometranscriptional activator Ogr/delta1e-0652
NC_012917:3684840:369156636915663691814249Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional activator Ogr/delta2e-0651.2
NC_017047:3174588:319277031927703192973204Rahnella aquatilis HX2 chromosome, complete genometranscriptional activator Ogr/delta7e-0649.3