Pre_GI: BLASTP Hits

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Query: NC_004349:3938:22779 Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence

Start: 22779, End: 24653, Length: 1875

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009719:336000:3396883396883415981911Parvibaculum lavamentivorans DS-1 chromosome, complete genomenuclease6e-42172
NC_020453:3950838:3981993398199339840082016Agromonas oligotrophica S58 DNA, complete genomehypothetical protein6e-38159
NC_010338:4108280:4130621413062141327052085Caulobacter sp. K31, complete genomeParB domain protein nuclease4e-36153
NC_012988:1280610:1280610128061012827692160Methylobacterium extorquens DM4, complete genomeplasmid stabilization protein6e-36152
NC_015422:1694363:1696336169633616983872052Alicycliphilus denitrificans K601 chromosome, complete genomeParB domain-containing protein nuclease2e-34148
NC_010725:3273261:3287698328769832898422145Methylobacterium populi BJ001, complete genomeParB domain protein nuclease2e-34147
NC_010170:4800000:4813659481365948157702112Bordetella petrii, complete genomeParB-like nuclease7e-34145
NC_016147:1961000:1981052198105219831122061Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative chromosome segregation protein2e-33144
NC_015580:293803:3170463170463192202175Novosphingobium sp. PP1Y, complete genomeParB family chromosome partitioning protein1e-32141
NC_010084:2484000:2533114253311425351622049Burkholderia multivorans ATCC 17616 chromosome 1, completenuclease1e-32141
NC_008782:3110744:3112655311265531147062052Acidovorax sp. JS42, complete genomeParB domain protein nuclease2e-32140
NC_010002:3002354:3002354300235430044202067Delftia acidovorans SPH-1, complete genomeParB domain protein nuclease3e-32140
NC_015381:2859000:2900012290001229020632052Burkholderia gladioli BSR3 chromosome 1, complete sequencenuclease5e-32139
NC_009937:4392108:4392108439210843941712064Azorhizobium caulinodans ORS 571, complete genomeParB-like partition protein8e-32139
NC_009720:622262:6440426440426461052064Xanthobacter autotrophicus Py2, complete genomeparB-like partition protein1e-31138
NC_020829:2152000:2153691215369121557332043Pseudomonas denitrificans ATCC 13867, complete genomeputative chromosome segregation protein8e-31135
NC_011365:1171536:1186452118645211885092058Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeParB domain-containing protein nuclease9e-31135
NC_011992:1318691:1336817133681713388862070Acidovorax ebreus TPSY, complete genomeParB domain protein nuclease1e-30134
NC_009720:813157:8158788158788180822205Xanthobacter autotrophicus Py2, complete genomenuclease2e-30134
NC_009668:445134:4816144816144837642151Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencehypothetical protein4e-30133
NC_014910:242845:2722082722082742622055Alicycliphilus denitrificans BC chromosome, complete genomeparb domain protein nuclease8e-30132
NC_018691:3041851:3056596305659630586742079Alcanivorax dieselolei B5 chromosome, complete genomePutative ParB-like nuclease domain protein (Rc106)8e-30132
NC_009720:5046861:5062145506214550642082064Xanthobacter autotrophicus Py2, complete genomeparB-like partition protein7e-30132
NC_010125:955863:9702419702419722982058Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein3e-29130
NC_010170:2246993:2259737225973722618002064Bordetella petrii, complete genomeParB-like nuclease3e-29130
NC_010943:1332243:1357451135745113594812031Stenotrophomonas maltophilia K279a, complete genomeputative ParB-like nuclease domain protein4e-29130
NC_010125:74904:8867788677907342058Gluconacetobacter diazotrophicus PAl 5, complete genome4e-29130
NC_008752:725189:7408687408687429132046Acidovorax avenae subsp. citrulli AAC00-1, complete genomeParB domain protein nuclease8e-29129
NC_017249:2109843:2109843210984321119662124Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein7e-29129
NC_014217:2987450:2989997298999729920602064Starkeya novella DSM 506 chromosome, complete genomeParB domain protein nuclease2e-28127
NC_015186:2931000:2932165293216529343542190Acidiphilium multivorum AIU301, complete genomehypothetical protein4e-27123
NC_009656:3869281:3874118387411838761962079Pseudomonas aeruginosa PA7 chromosome, complete genomenuclease9e-27122
NC_003295:2787371:2817109281710928189021794Ralstonia solanacearum GMI1000, complete genomehypothetical protein9e-27122
NC_008044:1736000:1745947174594717478181872Silicibacter sp. TM1040, complete genomeParB-like nuclease1e-26121
NC_010125:2884762:2891700289170028938322133Gluconacetobacter diazotrophicus PAl 5, complete genomeputative ParB-like nuclease4e-25116
NC_011963:1979136:1979136197913619809591824Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceParB family protein4e-25116
NC_011958:735755:755097755097755990894Rhodobacter sphaeroides KD131 chromosome 2, complete genomeParB family protein4e-22107
NC_015136:1141925:1144886114488611471292244Burkholderia sp. CCGE1001 chromosome 1, complete sequencechromosome partioning protein ParB4e-22107
NC_014305:126029:1260291260291280322004Erwinia billingiae Eb661 plasmid pEB170, complete sequenceParB-like nuclease6e-2099.8
NC_010505:5496170:5520586552058655223731788Methylobacterium radiotolerans JCM 2831, complete genomeParB domain protein nuclease2e-1997.8
NC_007951:2087385:2088389208838920906862298Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative chromosome partitioning nuclease, ParB9e-1995.9
NC_010158:92819:1125241125241145332010Yersinia pestis Angola plasmid pMT-pPCP, complete sequenceParB domain protein5e-1583.2
NC_008118:56777:98872988721008812010Yersinia pestis Nepal516 plasmid pMT, complete sequenceDNA-binding protein5e-1583.2
NC_004838:51013:7073070730727392010Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein5e-1583.2
NC_005815:61148:8390783907859162010Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completeputative DNA-binding protein5e-1583.2
NC_009378:106193:1349641349641369732010Yersinia pestis Pestoides F plasmid MT, complete sequenceDNA-binding protein5e-1583.2
NC_002128:35000:4793847938498961959Escherichia coli O157:H7 str. Sakai plasmid pO157, completehypothetical protein8e-1582.4
NC_007414:56508:7045370453724712019Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencehypothetical protein1e-1482.4
NC_015259:485015:5206245206245224651842Polymorphum gilvum SL003B-26A1 chromosome, complete genomeHelix-turn-helix, Fis-type2e-1377.8
NC_015675:6276357:6276357627635762780841728Mesorhizobium opportunistum WSM2075 chromosome, complete genomeparB-like partition protein7e-0962.8
NC_019973:5650646:5650646565064656523731728Mesorhizobium australicum WSM2073, complete genomeParB-like partition protein7e-0962.8
NC_014923:5721686:5721686572168657234131728Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeparB-like partition protein7e-0962.8
NC_008254:2496622:249662224966222497092471Mesorhizobium sp. BNC1, complete genomeParB-like nuclease9e-0859.3
NC_014006:344331:3624493624493642091761Sphingobium japonicum UT26S chromosome 1, complete genomeParB-like protein1e-0758.9
NC_012483:3672768:3696128369612836977171590Acidobacterium capsulatum ATCC 51196, complete genomeParB family protein1e-0758.5
NC_010338:2136193:2155392215539221572181827Caulobacter sp. K31, complete genomeParB domain protein nuclease6e-0653.1