Pre_GI: BLASTP Hits

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Query: NC_004347:3303957:3305360 Shewanella oneidensis MR-1, complete genome

Start: 3305360, End: 3305740, Length: 381

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004459:349500:393267393267393737471Vibrio vulnificus CMCP6 chromosome I, complete sequencePredicted transcriptional regulator1e-1581.6
NC_005139:796546:801777801777802259483Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted transcriptional regulator2e-1580.9
NC_012668:2744393:279251827925182792985468Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-1478.6
NC_016445:338288:348318348318348785468Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-1478.6
NC_016944:859492:867838867838868305468Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional regulator1e-1478.6
NC_002505:860789:870819870819871298480Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator, putative1e-1478.6
NC_009457:351512:361542361542362021480Vibrio cholerae O395 chromosome 2, complete sequencetranscriptional regulator1e-1478.6
NC_012578:818241:828271828271828750480Vibrio cholerae M66-2 chromosome I, complete sequenceputative transcriptional regulator1e-1478.6
NC_012582:882931:892961892961893440480Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative transcriptional regulator1e-1478.6
NC_009053:1895485:190518919051891905518330Actinobacillus pleuropneumoniae L20, complete genomeputative transcriptional regulator8e-1372.4
NC_013956:2749685:275249327524932752828336Pantoea ananatis LMG 20103 chromosome, complete genomeYcjC1e-0961.6
NC_016816:1676460:170624717062471706582336Pantoea ananatis LMG 5342, complete genomeputative transcriptional regulator1e-0961.6